result

Gene information

Detail information of AfisC7G04260

Location

Gene	Chr	Start	End	Strand
AfisC7G04260	chr7	798945127	798946286	+

Sequences

CDS

Protein

Gene

>AfisC7G04260
CTCATATCACACGATCTCAGCATCATATCCTATAAGATTCCCATTCTCATCATTTTTTTATAGTAACTGGCAAAGAAGGAGAGAAAAAAGGATAAAAAATGGGTGTACCTACTGGGAAGAAAGAAGAAAAAGAGCGCAGAATGAACAAGGAAATGAAGAAATATATAGGTGTAAGGCAGAGGCCATCAGGAAGATGGGTGGCTGAGATCAAAGACTCGTTGCAGAAGGTGCGACTATGGCTGGGTACCTTCGATACAGCTGAAGATGCTGCAAAGGCTTACGACGATGCTGCACGTACGCTTAGAGGATCCAACGCTCGTACCAACTTCGATGTTGGAAACGCCTCTTCGTCAATGAACGGTGGGGATGCATTGGAGAATTTAGCTCCTTTTTCATTTGAAGATTCCAGTGAAGCTAAAGAAGGACTTATCGGTTTGCTTAAGGCGAAGTTGTTGGATGGAAAGACTGTTAAGATGCCACAGGGCAGTCGAGTTCTGCCTAACAGCATCCAGTATAATAATAGTAACAATAATTGTAACGGTAATAGGAATGGTAATAATAACGATACAGGTGGTGCATGGTGGCCAACAACAACGATGCCCATGCAGCAGACGACGGGCTTTTCCAGGCCGTTATCGGGTCTTGAGAAACAAATGTTTACGGGTTTGGAGGCCCAAATGATGACGATGGATAGCAGGGCTATAGCAAACAACAATAATGTTAATAACAGTGTGGATCAGTTTGGGAATGGAGGAAACAGTGGGGGTAGTTGTAGTATAAGTGCGATAATGGAGTATTTGGATGGATGGAATGTGATGAATGGTGTGAATGAGCCTTTGCTGCCGCTTGTAAGTAATGATATGAAAGGGAAGGAGGTTGATGATGGTTTGAATATGATAGGGGGACATGTACAGGATGGAGGGATGTGGTCGTCTGGAAGCAATTCTTCGACTATGTCCTTTGATGAAGCGGCCATGAACTGTGACTTGCAAGGTTCTTGGGATTCTTTTGTTTTTGATTTTGCTGCAAACTAAGTTTGTTATTGGGGTATATGTTTTCGAAAATGTAATTAGTTAATGGTTTCTGCTATAGTTTTATTACATTTTTTTTGTTAATCTAGTGGTGTAATAATGTTTGGATTAAACATGTTTTTTCAATGT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_021674344.1	4.2e-33	uncharacterized protein LOC110660360
Swissprot	A0A1X9PY88.1	1.8e-20	Protein ERF REQUIRED FOR NODULATION 1
trEMBL	A0A8B7CXM1	5.2e-33	uncharacterized protein LOC103720713

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G19790.1	66.22	9e-23	104	RAP2.11	related to AP2 11

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G04260	AT5G19790.1	74	22	2	5	77	6	77	66.22	9e-23	104
AfisC7G04260	AT5G44210.1	75	31	1	15	89	27	100	57.33	2e-18	90.1
AfisC7G04260	AT3G20310.1	65	25	0	21	85	26	90	61.54	4e-18	89.0

Ortholog group

Species	Genes
Allium cepa	g514347.t1
Allium fistulosum	AfisC7G04260
Allium sativum	Asa3G01585.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	21	70	47.9	1.1e-12

Gene Ontology

Accession	Ontology	Name
GO:0000302	P	response to reactive oxygen species
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0016020	C	membrane
GO:0005737	C	cytoplasm
GO:0042802	F	identical protein binding
GO:0009414	P	response to water deprivation
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009737	P	response to abscisic acid
GO:0009740	P	gibberellic acid mediated signaling pathway
GO:0009864	P	induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010030	P	positive regulation of seed germination
GO:0010105	P	negative regulation of ethylene-activated signaling pathway
GO:0010143	P	cutin biosynthetic process
GO:0010166	P	wax metabolic process
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0016604	C	nuclear body
GO:0019760	P	glucosinolate metabolic process
GO:0035865	P	cellular response to potassium ion
GO:0042991	P	transcription factor import into nucleus
GO:0043565	F	sequence-specific DNA binding
GO:0048528	P	post-embryonic root development
GO:0048825	P	cotyledon development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network