result

Gene information

Detail information of AfisC7G04421

Location

Gene	Chr	Start	End	Strand
AfisC7G04421	chr7	821071162	821072607	-

Sequences

CDS

>AfisC7G04421
ATGGAACACACAGTTCTCCCTCCTACAAACTTTACTGTCGATGGAAACGAAGACGAACTCACCGATCATAATTTCAATGAAGCATTGCTAGAATACAGAATCTGGAGAGACACGACTCGTCTCAAACTTATAAGAGAAAAGAAAACCATTGAACAAGACCATAATATGATCGACCCTAATTGTAGAAAAAAAATGTCAAGAATCCAAGACTCAGTGCTGGAACTAATGCTTAAAGCAATGGAAAGTTGCAATGCCCAAGGCTTTGTTTATGGTATAATACCCGAAAGTGGGAAGCCCGTTAGTGGTGTTTCAGAAAACTTACGTGCATGGTGGAAAGAGAAGGTTAAGTTTGACATAAATGCACCTTTGGCTATTGAAAACTATGCATCTCAACATACGTCTCTCAATGGTGAGCAAACAGGTGAAATAAATATAAGAGAGAAGCTGTTTGAACTTCACGATACGACGCTTGGGTCTCTGCTTTCTTCTCTGATGCCACATTGCAATCCACCTCAGAGAACCTTCCCGTTGGAGCAAGGGATCCCACCGCCATGGTGGCCTACCACTAATGAGGAATGGTGGGCTGAGCTTGGATTTCCTACAGACGAAGGAGTTCCTCCTTTCAAAAAGCCACATGATTTGAAAAAACATTGGAAAGTTGGTGTTGTTACTGGGGTTCTTAAACACTTAAGTCCAAATACTAATAAAGTTTGGGAGATTATTAAGCACTCGAAAAGCCTACAAGATAAAATGACAGCTAAAGATTGTATTGTGTTGTCTAAAGTTCTTGATCAGCTAGATCAAGATTATCGGAAGAAGCAGCACCCATATCTGCCTAAATTGTTTGCTGCAGGTGGAAGCTTTGGTAATTACAATGTAGAAGCTATAGATTCAGAGAATAATTTGAGAAATGAAATGACTGGCAATGAAGAAAGCAATCCGATATATGGGTGTAATAGAAGTGCACCACCAGTTTTGGCTGAAGATCACAACCAAAGAATTTTTACAAATAGGGCTCAATTTGGCACCTACATGAATTTTTCTGGAGGTAACTTGGTTATGGCTACTGAGATGAACTTGAATTCAGATTTTAAAACTCAATGTTTAACTGACATGAACACTCAACGTAATGGGTATGTTCAAAATGGGGGATCTATGAATCAGAGCAATGATAACATTTTAGGCAATATTGCTCATACTCAATATAATGTGTATGAGCAAAATGTGGGATCTATGAATCAGAGCAATGATAACATTTTAGGCAATATTGCTCATACTCAATATAATGTGTATGAGCAAAATGTGGGATATATGAATCAGAGCAATGATAACTCGACTGTCGAGTTTGCAGCAATGCAAGGTCATGGATTTCATGGTATGAGTTATTATGATGAGGCGATGAGAACGAGCGGCTTGGATGAATGGTTTGGTACTGGAAACTCCTAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020253600.1	3.0e-86	protein ETHYLENE INSENSITIVE 3-like
Swissprot	O24606.1	6.7e-75	Protein ETHYLENE INSENSITIVE 3
trEMBL	A0A5P1FKJ4	2.2e-86	ETHYLENE INSENSITIVE 3-like 1 protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G20770.1	47.54	6e-77	285	AtEIN3;EIN3	Ethylene insensitive 3 family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G04421	AT3G20770.1	305	143	4	17	305	38	341	47.54	6e-77	285
AfisC7G04421	AT2G27050.1	257	114	2	19	265	40	296	51.75	1e-75	281
AfisC7G04421	AT1G73730.1	425	212	10	17	424	27	423	39.53	6e-74	275

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC7G04421
Allium sativum	Asa6G03289.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04873.10	EIN3	Family	30	265	317.1	6.4e-95

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0001666	P	response to hypoxia
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009873	P	ethylene-activated signaling pathway
GO:0010182	P	sugar mediated signaling pathway
GO:0042762	P	regulation of sulfur metabolic process
GO:0071281	P	cellular response to iron ion
GO:0080167	P	response to karrikin

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14514	EIN3; ethylene-insensitive protein 3	EC:-	MAPK signaling pathway - plant	ko04016
K14514	EIN3; ethylene-insensitive protein 3	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network