result

Gene information

Detail information of AfisC7G04466

Location

Gene	Chr	Start	End	Strand
AfisC7G04466	chr7	826412796	826413809	-

Sequences

CDS

Protein

Gene

>AfisC7G04466
ATGGAGCCCTGGACGTTTGAGCAACATCTTGGCGAAGCAGTTTTTATTCCAGCAGGATGCCCTCATCAAGTAACAAATAGAAAGGTTAGTGTTCTCTATACTCTATTATTGATTGATATATAGAGGATTTTAGCAACGGTGTAATGAATTCATATTTTTGTTATTTTTTTTATCATAATTATACATCAGATTATTTTGCTTTTTATTTAAGATGGTACATTTATTGATTTTCTTAGATATTATAGGATGTTTATACTGTACTTTATATAAATAATTTGATCTATTTGTCTCAACTGATGATTTTCACCCTTGATAAATTTGAGAGACTTACTGGAGAAAAACTAGATAGTCTCAAACCAAAGAAAAATAACTAGAAACTAATTTCATTTAATCCTAGAAAAATGTCACTAAAAATATAAGTATAGTCATTATATATGTATTCAATTATACAATATTTTTCTCATTTTTCCTTTTGCGTGGTAGCGTGTATGTGTGTAAAATCTCTGTGTGTGTGTATTCAGTTATGAGTCTAAACTTTTGTTATTGTAATTTTTCAGTCTTGCATTAGAGTAGCCATGGACTTTGTTTCTCCTGAGAGTCTCATTCAATGTGTCAGTTTAACTGAAGAGTTTCAACTGCTTCCAAAAACTCATAGGTCAAAGGAAGACAAATTAGAGGTACATATTGTTTTCAGTTAATGTATTTAGAAAAAAAAGAAAAGAAAATCATTTCTCGCTTAAGTTAGCAACTTCATCTGCATTTCTCTCTGTGATCATGTATACTTATGAACTAAAGATCTTATTATTTTTCTTGGTTTATAACTCTATGCCCGGATTAGTTAGCTTCACATGATGTAGAAACTGACCTGACAGCTGTTCCATATTTTGTATGCATGTAAAGAAAATGTCTGTATATTCCATGCAAGAAGCTGTGAAAGAAGCTAAAAAATTGATATCCTCTATCTGGTCAGACTGGTGTATTTACAAGTTACTGAACAATGCTTCTGTCAAATAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK69164.1	1.4e-31	uncharacterized protein A4U43_C05F20010
Swissprot	Q9SSE9.1	9.6e-22	Protein JUMONJI 25
trEMBL	A0A5P1ETN3	9.9e-32	JmjC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G00990.1	63.74	5e-31	129		Transcription factor jumonji (jmjC) domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G04466	AT4G00990.1	91	32	1	1	91	745	834	63.74	5e-31	129
AfisC7G04466	AT1G11950.1	89	34	1	1	89	784	871	60.67	6e-29	122
AfisC7G04466	AT1G62310.1	71	23	0	1	71	810	880	67.61	2e-25	110

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC7G04466
Allium sativum
Arabidopsis thaliana
Oryza sativa	LOC_Os09g22070.1; LOC_Os11g45470.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02373.19	JmjC	Domain	2	37	40.6	2.7e-10

Gene Ontology

Accession	Ontology	Name
GO:0000785	C	chromatin
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0046872	F	metal ion binding
GO:0005654	C	nucleoplasm
GO:0055114	P	oxidation-reduction process
GO:0008168	F	methyltransferase activity
GO:0009555	P	pollen development
GO:0009908	P	flower development
GO:0031490	F	chromatin DNA binding
GO:0032454	F	histone demethylase activity (H3-K9 specific)
GO:0032776	P	DNA methylation on cytosine
GO:0033169	P	histone H3-K9 demethylation
GO:0048366	P	leaf development
GO:0051213	F	dioxygenase activity
GO:0060969	P	negative regulation of gene silencing
GO:0070919	P	production of siRNA involved in chromatin silencing by small RNA
GO:0080188	P	RNA-directed DNA methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network