Detail information of AfisC7G04558


Location
GeneChrStartEndStrand
AfisC7G04558chr7840745722840755522-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252695.13.9e-303uncharacterized protein LOC109829986 isoform X6
SwissprotF4IXE7.12.1e-75Repressor of silencing 4
trEMBLA0A5P1FI246.1e-282PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G58610.142.633e-96 350PHD finger transcription factor, putative

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05641.9AgenetDomain2510046.53.5e-12
PF16135.2JasFamily61768759.81.9e-16
PF00628.26PHDDomain72776932.07.4e-08

Gene Ontology
AccessionOntologyName
GO:0042393Fhistone binding
GO:0004402Fhistone acetyltransferase activity
GO:0005634Cnucleus
GO:0009506Cplasmodesma
GO:0010385Fdouble-stranded methylated DNA binding
GO:0043971Phistone H3-K18 acetylation
GO:0043972Phistone H3-K23 acetylation
GO:0044030Pregulation of DNA methylation
GO:0044154Phistone H3-K14 acetylation
GO:0080188PRNA-directed DNA methylation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.