result

Gene information

Detail information of AfisC7G04573

Location

Gene	Chr	Start	End	Strand
AfisC7G04573	chr7	843838695	843842924	-

Sequences

CDS

>AfisC7G04573
ATGAGCTGTTTTCCTTGTTTTGGGAAGAGAAAGAAAGATAATGATGGTACTCTTGCAAATGATGGGAATCATCAAGTGAATAACGGGCCTAAAAATCACGAAGCTAAACCGAAAATCACGGAAACACAGGGCCCTGCTGGTACAGAAAATATCAAAGCTCAGAGTTTCACATTCCGCGAGCTAGCTACAGCCACAAAGAATTTTACACCTGACTGTCTTTTGGGTGAAGGGGGCTTAGGCAGAGTTTATAAAGGATGCCTTGAGAATGGCCAGGTAGTAGCAGTAAAGCAATTAGGCAGAAATAGCCTACAAGACAGCAAAGAGTTTCTTCATGAAATCTCGAAGCTTAGTTTACTACAACATCCCAATCTTGTCAATCTTGTTGGGTACTGTGCGGATGGAGAACAGAGACTTTTGGTCCATGAGTTCATTCCCAAAGGCACCTTAGAAGACCATTTGTTCGATCTGAAACCAGATCAGGTGCCATTGGACTGGTACACAAGGATGAGAATAGCATATGGAGCTGCTCAGGGTCTTGAATATCTTCATGACAAAGCAAATCCTCCTATTATCTATCGTGATTTAAAATCATCCAACTTTTTACTTGATGATGATTTAAATCCAAAACTCTCGGACTTTGGAGTTGGTAAACTAGGCCCTTCAGGAGATAAACCGGTGATATCATCAAGCATTATGGGCACGTATGGATATTGTGCACCTGAATATTCCATGGGTGGGGAAGTAACCCTTAAATCTGATCTTTATAGCTTTGGAGTTGTTCTTTTGGAGCTTATTACTGGGAGAAGAGCTCTCGATACTTCCATGCCATCTAGCGAACAAAATCTTGTATCTTGGGCGCAACCGTATTTCCACGATCAAAAGAGGTACCCCGAGCTAGTAGACCCAAAGCTTAAAGACAACTATCCAACAAAGGGCTTGAATCAAGCGGTTGCTATCGCTTCCATGTGCATCCAAGACGAACCATCTGTCCGTCCAATAGTAGCAGACGTTGTCATGACTCTAGGCTTCTTAATAGAACCCATGCCCTCTCCACAACCCAGCCCTATACCCGATCAAGCACCACAACCGAAACCCGAATCAGAGAATTCAGACTCATCATACACGGATTCAGATGGCTCAAGCGAACACGTTGTAGAAACTCTTCAGTTGGGGAAAAGAAGGCAAGAGCCAAAACCAAGTAGTCGTTCCAACTCTAAAAGAAGGTCTAGTCGTGCAAGTGCTTCTAGCTATGAGAGTGAAGCTAGTTCCTGCTCCAATAGCAGTTCCAAAAAGTACGATGATGAAAACGGAAGTAAGAGACGTATGAGCTCAAAAAGACACAGTAGAAAGGTAAATTCTAGCTCCATACGCCCAATTTACGATGACTATGGAAGCAAGAAGTGTCCAAGCTCAAGAGTACAGAGCAAGAAGCTAAGTTCAAGTTCGAAAAATTATGAAGATGTGTTTGAATCTGATGAAAACAAAGGGAGTTTGAGCTCAAAACATCATGAAGAAGTTCAAGAACATGAAAATAAGGGAAGGCTGAGTGCAAAACATAGTAAGAAACATAGCAAGAAGATAAGATCAAACTCAAATGCTCATGAAGAACATAAAGATTCATCGGGAAGTGAAAGCGAGAAGAGTTTGAGCTCTGATAGTATGAAGGAATCGTCTAAAATGGAAAGTGGTAAGTTTACGAGTCTGAAGTTGTCTGCAGGATCATCTAAGCATGAAAATTATAATGCAGAGGGAAGTGAAGGTGAAGCTTCTGGTTCAGAGCACTCCGACAAAGCTGAAGAGTCCGAACACGAGTATGAATCTGATTGA

Protein

Gene

>AfisC7G04573
ATTGAATCCACATCTCCCCCCTTAATCTTCGCCATCCCCATTCAAATATGTCCTCAGATCCAAAATAAGTGAAAGAGAAAAAGGAAATTCCCCAAAATTTTCCATTATTTTCTCCCCCAAATCGAAAAAAGAAATACTTCTCCGTCCCAGATCGGACTTTGGCCTTCCCGTCAGGGCTTCTCCATTCTTCCGGGCTGCATCCGGTCTGGGCACGGCTCTTTTACCCAATACTTTCTGTTATATCGTCTGCATTTTCATAGCTTTCATTCTTTATACATGGTTACATAGAGTTTGATGAGTACTTCACGACAAAACTGGCAATAATAATAATTGGGGTACTTAAAAAAGATTGAACCTGAAAGTGCGAAATGAGCTGTTTTCCTTGTTTTGGGAAGAGAAAGAAAGATAATGATGGTACTCTTGCAAATGATGGGAATCATCAAGTGAATAACGGGCCTAAAAATCACGGTGAGGTTTCCATTCTTTTTTTATTACTTTTTCTTTCTTCATTTTTTCATTTTATTCTCGTTGGAATTTCGTTGAACACCTCTATTGCGGTGGATTTTAAGTGCAAAAAACAGTTTTGTACCAGGAATTATAATTCCGTTATATCAATAATACCGAGTTCTTTCTGGTATTACATAAAGTTTTGAATGTAGAGAGTTTGGACAGGCGTATTTTTAACTAATTCCATGTTATATTGAATAAAAAGAAGTAACATAAGCTCATAATTCATTTTTCTGCAATGTCAAAAGCAAAATCGTTGATCAGTCAATAAAGAAATGTTACACATTCTTGATAATCAGATAGGCTCTAACTCTTTGACTGCTAGGTTTAGTGAAAATATTACCTTTCTACTTGAAAATTGTGTGCTCAAAAAAACATTTCTCTGTTGAACTAAAATACGAACCTTTTTGTTCTGAAACTACAATCTTCTTGTTTTATTCAGAAGCTAAACCGAAAATCACGGAAACACAGGGCCCTGCTGGTACAGAAAATATCAAAGCTCAGAGTTTCACATTCCGCGAGCTAGCTACAGCCACAAAGAATTTTACACCTGACTGTCTTTTGGGTGAAGGGGGCTTAGGCAGAGTTTATAAAGGATGCCTTGAGAATGGCCAGGTAAATCAATTTTTAACTAAACAATCATAGAAATCATGGCAACATTACATCAATTGAGTTGGGTTAATAATCAGTTCAAAGGCTCCAGATACAAGTAAAAGGGCAAAACTTATAGTTCAAGATTTATGGTTATGCAAAGAACGCAAATTGATTATAGCATATTGGTTAGTCTTTCTGTGATGCTACTAAGCTCTACCCGTAATCTCTCAAATGCAAGAGCCTCGGATTTTATTATTCTCACGTTGAAGAAACTTCTACTTTCTTCTTCTTCTAATTTCAGCTTCTATTTTCTCCACAATAGGTAGTAGCAGTAAAGCAATTAGGCAGAAATAGCCTACAAGACAGCAAAGAGTTTCTTCATGAAATCTCGAAGCTTAGTTTACTACAACATCCCAATCTTGTCAATCTTGTTGGGTACTGTGCGGATGGAGAACAGAGACTTTTGGTCCATGAGTTCATTCCCAAAGGCACCTTAGAAGACCATTTGTTCGGTAAGCATTTACTTAAAGTGTGTGTATCGATACATTGTGCCTGTTTATTTGTGTGCATGCACATGCATGATCATAACACACCGATACAAACATAATAAAATTTGAATGTATATGCAGATCTGAAACCAGATCAGGTGCCATTGGACTGGTACACAAGGATGAGAATAGCATATGGAGCTGCTCAGGGTCTTGAATATCTTCATGACAAAGCAAATCCTCCTATTATCTATCGTGATTTAAAATCATCCAACTTTTTACTTGATGATGATTTAAATCCAAAACTCTCGGACTTTGGAGTTGGTAAACTAGGCCCTTCAGGAGATAAACCGGTGATATCATCAAGCATTATGGGCACGTATGGATATTGTGCACCTGAATATTCCATGGGTGGGGAAGTAACCCTTAAATCTGATCTTTATAGCTTTGGAGTTGTTCTTTTGGAGCTTATTACTGGGAGAAGAGCTCTCGATACTTCCATGCCATCTAGCGAACAAAATCTTGTATCTTGGGTAAGAATTCACTATTATATCTATAATTTGGAAAACATAGAAAGAGTTACATTTCCATATGATCCTTAAGTAGTGTAAGATAACCTTTAAAAGCTGGCTATACATATTAAAAGATCAGCTATATTTTCTAATTGACTTACCAGGGAGTGTTTTCTCACTCCCTACGCCTAGCATTTCGTGACGTAGAAATAGTAACATGTGTTGGACAATGTTTGATGTACCATCATCAAAATGTTTATCACTGTACACATATGAAATAAATGATGCGTGTGATGCATGTGAAATAAATGACAGTTAAGACTGGAGACTAGAGACCCATCCAAACTTCTTTTTGAGCAAATTTTAATAAACAAACTAGTTGGTTAAAATATTTTTCCACTAAATTATTGTAATTCTGAATTACTCATTTGAGCTCAGTGTATATAAACATTTATCAATCTCATTTGTGCATTGTCAGCCCCGACCTACTGGGTTTCTCCAACCCGCTAGTTTGATTGGTTGCTTTCTAAGCTGCATCTGTGCGTACACACATAGATCATCTGTCCTTAAATTACATGTGCCCTATGTCCCCTTCTAATATTTACCGTCCATTTCATCAATAAATCAAAATAATTAATTTTCTTTGTAATAAGTGAATGGAGATGATATAAAAGTACATGAGGCACATGACTTTGGAGGACATGATATTCCAACTTGTTTGGACATGCAAATTATGTGTACATTAATACACATGATCTTTTATGTGTATTATGACATGGAGAGTAATTATATGTGGTTACAAGGAAAGAGACTCATATCATCCCTACATTGATCTTAACTTTCAATATACATTGACATGATAGGCGCAACCGTATTTCCACGATCAAAAGAGGTACCCCGAGCTAGTAGACCCAAAGCTTAAAGACAACTATCCAACAAAGGGCTTGAATCAAGCGGTTGCTATCGCTTCCATGTGCATCCAAGACGAACCATCTGTCCGTCCAATAGTAGCAGACGTTGTCATGACTCTAGGCTTCTTAATAGAACCCATGCCCTCTCCACAACCCAGCCCTATACCCGATCAAGCACCACAACCGAAACCCGAATCAGAGAATTCAGACTCATCATACACGGATTCAGATGGCTCAAGCGAACACGTTGTAGAAACTCTTCAGTTGGGGAAAAGAAGGCAAGAGCCAAAACCAAGTAGTCGTTCCAACTCTAAAAGAAGGTCTAGTCGTGCAAGTGCTTCTAGCTATGAGAGTGAAGCTAGTTCCTGCTCCAATAGCAGTTCCAAAAAGTACGATGATGAAAACGGAAGTAAGAGACGTATGAGCTCAAAAAGACACAGTAGAAAGGTAAATTCTAGCTCCATACGCCCAATTTACGATGACTATGGAAGCAAGAAGTGTCCAAGCTCAAGAGTACAGAGCAAGAAGCTAAGTTCAAGTTCGAAAAATTATGAAGATGTGTTTGAATCTGATGAAAACAAAGGGAGTTTGAGCTCAAAACATCATGAAGAAGTTCAAGAACATGAAAATAAGGGAAGGCTGAGTGCAAAACATAGTAAGAAACATAGCAAGAAGATAAGATCAAACTCAAATGCTCATGAAGAACATAAAGATTCATCGGGAAGTGAAAGCGAGAAGAGTTTGAGCTCTGATAGTATGAAGGAATCGTCTAAAATGGAAAGTGGTAAGTTTACGAGTCTGAAGTTGTCTGCAGGATCATCTAAGCATGAAAATTATAATGCAGAGGGAAGTGAAGGTGAAGCTTCTGGTTCAGAGCACTCCGACAAAGCTGAAGAGTCCGAACACGAGTATGAATCTGATTGATACTGTGCAATGCGCGTAAATATTCGATTTTTTGTGCATATTTATAATTTATTCACACGGTTGTTGATGATATGAACATTATAAGACCTGAAAATTTTATTTAGGAGGCAGCTTTCATGAAATTACATTGGAAAGTTCGTTATAAAAGATAGGAAAATGTTAATTTAGGCGAAATAATTTGTTATCTTATATGATAATGGTATACCATATGAAAGCGTACCGGTATCTATTTGTTTATATTGAGGATGTTTTCAGTTCTCTGTTTTGGCACTCATGTTGTGAGTTGAATTTAAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241342.1	4.6e-132	probable serine/threonine-protein kinase PBL25
Swissprot	Q9SFT7.1	1.1e-122	PBS1-like protein 26
trEMBL	A0A199W6E2	4.3e-132	Serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G07070.1	56.33	1e-130	464		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G04573	AT3G07070.1	403	162	4	1	391	1	401	56.33	1e-130	464
AfisC7G04573	AT5G18610.2	364	121	7	3	344	4	360	58.79	1e-126	450
AfisC7G04573	AT5G18610.1	364	121	7	3	344	4	360	58.79	1e-126	450

Ortholog group

Species	Genes
Allium cepa	g471860.t1
Allium fistulosum	AfisC7G04573
Allium sativum	Asa3G01374.1
Arabidopsis thaliana	AT3G07070.1; AT4G13190.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	73	337	145.4	1.8e-42

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0016021	C	integral component of membrane
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0040007	P	growth
GO:0007166	P	cell surface receptor signaling pathway
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009941	C	chloroplast envelope
GO:0010183	P	pollen tube guidance
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0046777	P	protein autophosphorylation
GO:0071323	P	cellular response to chitin
GO:0090404	C	pollen tube tip
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13430	PBS1; serine/threonine-protein kinase PBS1	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network