result

Gene information

Detail information of AfisC7G04750

Location

Gene	Chr	Start	End	Strand
AfisC7G04750	chr7	872563013	872565514	+

Sequences

CDS

>AfisC7G04750
ATGTCGAAAACTACTTTTCCTCTTTCATCAGTTCTCTTCCATGTCTTTCTCCTCGCATTTTCCATAAATTCATCAGTATCAAAAGCCGATCAAACCACCTTAACAAAAGGATCATCTCTACACATAGAGAAAGATTCCAATTTCTTACTTTCACAAGACAAATCATTCACGTGTGGTTTCTACAAGGTTGGTGAAAATGCATATACTTTCTCAATCTGGTTTTCGAACTCAGTCGACAAAGCTATTGCATGGACTGCAAACCTTAACCAACCAGTAAATGGCCATGGATCGAGGATTACATTCAGCTCTGATGGAGGTTTAATACTAGAAGATGTTGATGGTACAATTGTTTGGAGCACAAACACTAGCTCGACTCGAGCAGAATACGCTCAACTCTTGAACTCAGGTAACCTTGTAATAAAAAGTCCTAATGGTGAAATTCTATGGCAAAGTTTCGACTCTCCAATAAATACACTCTTACCTACACAGCCGATTACGAAGAACATAAAGCTTTCTTCTGGATACTACAATTTGATTTTCGATAATAACAATGTTTTGTCGTTGAAATATGATGGGCCGGAGATTTCAGGCATATATTGGCCTAACCCTGATTATGGTGTGTATGCCGATGGAAGAACAAACTACAATAGTAGCAGGTATGGAATTCTTAATGCAGATGGACTATTCATTGCTAGTGATCATCTAGCTATCAATGCTTCGGATCTAGATTCTAAAGTGCTAAGAAGGTTAACATTGGATTATGATGGTAATCTTAGGTTGTATAGTTTGAATAAAAAGAGAAAAACTTGGGTAGTTGTTTGGCAAGCATTTCCAAAAATATGTGATGTTCATGGCTTATGTGGAAAAAATGGGATTTGTTCTTATAAGCAAGACAAAGCATTTTGCTCATGCCCTCCGGGATTTAAAATGAGCAACCCGAGTGATTGGAGAGAAGGATGTAAGCCTAATTTTGATGTTGGTTGCAAAATGAACGAAAATGTGAAATTTGTTGAACTTCCTCAAACTGACTATTGGGGTTATGATCTAGCTGTTAATAACACTGCGTCATTGAATGATTGTAAAAATATTTGTTGGAAGGATTGCTCTTGTAAAGGGATACAATATAAATTAGGTGGAGGGTGTTTCCTCAAGAGTGCACTTTTTAATGGAAGATCCGCTCCAGATCACCCTGGAAGCATGCACATAAAAGTTTATACAGATTCAAATATAAGCATGAAAGATACATCTAACGTGCAACTGTCATGTGTTTCGAGTAAAGCAGAGAAAATGGGAAGTCTTTCAGATCTATATGGAAGCAAAAACGGAAAGACCAAATGGCGTTATTTCTATTGGTTTCTTTTAGCATTTGGGTTGATTGAATTTTTATTTATTTTCATTGGCTGGTGGTTTATTTTTCAAAGAGATCGAAGGCCAGCGTCAATTGAAGAAGAAGGTTATCGAAGGATATCCGATCACTTCAGAAAATTCACATACAAAGAGCTTAAACAGGCAACTTCAAGTTTCAGTGAGGAACTCGGAAGAGGAGGATCAGGGTCTGTTTATAAAGGTGTTTTAAAAGATAAGAGAATAGTAGCTGTTAAGAAACTGAAAGATGTAATACAAGGGGAAGATGAGTTTTGGGCTGAAGTAAGCGTGATAGGTAGAATTTACCATATGAATCTGGTAAGAATGTGGGGCTTTTGCTCGGAAAGTTCTCACAAAATCTTAGTATATGAGCATGTCCAGAATGGATCGTTAGATAAGCATATATTTGATGATAACAAAAGAATACTCGACTGGAATGAGAGGTTTAAGATTGTACTTGGTGTAGCAAAAGCATTAGCATACCTACACCATGAGTGCCTCGAGTGGATTGTTCATTGTGATGTAAAGCCAGAAAATATACTTTTGGACGAAAGTTTTGAGCCTAAGGTTGCAGACTTTGGATTAGCAAAACTATCAAAGAGAAGTTTTAATGATATGAATGTTTCACAAATAAGAGGAACAAGGGGTTACATGGCACCCGAATGGGCTTCAAATCTTCCAATTACTGCAAAAATTGATGTCTATAGCTATGGAATAGTGCTTTTAGAGATTGTGAAGGGAAGTAGAATTGGAGAGGATGAAAATGTTGATCTTTTGACACTCGTTAGGATATTAAAGGAAAAAATTGAGGCCGAATCAGCATCATGGATTGAAAATTTTGTTGATCACAAATTGAATAATACGTATAGCAGGAAGCAAGTGTTAGTGTTAATTAAGATTGCAGTGTCATGCTTAGAAGAAGATCGAAACAGAAGACCGTCTATGCATCAAGTTGTTCACATGATCATGCAATGTAAGAGTGAGACCAAATTTCCCAATTAG

Protein

Gene

>AfisC7G04750
ATTGGTATGTGTTCCTTCATTTCTTATCCAACATCTAACTATGTCGAAAACTACTTTTCCTCTTTCATCAGTTCTCTTCCATGTCTTTCTCCTCGCATTTTCCATAAATTCATCAGTATCAAAAGCCGATCAAACCACCTTAACAAAAGGATCATCTCTACACATAGAGAAAGATTCCAATTTCTTACTTTCACAAGACAAATCATTCACGTGTGGTTTCTACAAGGTTGGTGAAAATGCATATACTTTCTCAATCTGGTTTTCGAACTCAGTCGACAAAGCTATTGCATGGACTGCAAACCTTAACCAACCAGTAAATGGCCATGGATCGAGGATTACATTCAGCTCTGATGGAGGTTTAATACTAGAAGATGTTGATGGTACAATTGTTTGGAGCACAAACACTAGCTCGACTCGAGCAGAATACGCTCAACTCTTGAACTCAGGTAACCTTGTAATAAAAAGTCCTAATGGTGAAATTCTATGGCAAAGTTTCGACTCTCCAATAAATACACTCTTACCTACACAGCCGATTACGAAGAACATAAAGCTTTCTTCTGGATACTACAATTTGATTTTCGATAATAACAATGTTTTGTCGTTGAAATATGATGGGCCGGAGATTTCAGGCATATATTGGCCTAACCCTGATTATGGTGTGTATGCCGATGGAAGAACAAACTACAATAGTAGCAGGTATGGAATTCTTAATGCAGATGGACTATTCATTGCTAGTGATCATCTAGCTATCAATGCTTCGGATCTAGATTCTAAAGTGCTAAGAAGGTTAACATTGGATTATGATGGTAATCTTAGGTTGTATAGTTTGAATAAAAAGAGAAAAACTTGGGTAGTTGTTTGGCAAGCATTTCCAAAAATATGTGATGTTCATGGCTTATGTGGAAAAAATGGGATTTGTTCTTATAAGCAAGACAAAGCATTTTGCTCATGCCCTCCGGGATTTAAAATGAGCAACCCGAGTGATTGGAGAGAAGGATGTAAGCCTAATTTTGATGTTGGTTGCAAAATGAACGAAAATGTGAAATTTGTTGAACTTCCTCAAACTGACTATTGGGGTTATGATCTAGCTGTTAATAACACTGCGTCATTGAATGATTGTAAAAATATTTGTTGGAAGGATTGCTCTTGTAAAGGGATACAATATAAATTAGGTGGAGGGTGTTTCCTCAAGAGTGCACTTTTTAATGGAAGATCCGCTCCAGATCACCCTGGAAGCATGCACATAAAAGTTTATACAGATTCAAATATAAGCATGAAAGATACATCTAACGTGCAACTGTCATGTGTTTCGAGTAAAGCAGAGAAAATGGGAAGTCTTTCAGATCTATATGGAAGCAAAAACGGAAAGACCAAATGGCGTTATTTCTATTGGTTTCTTTTAGCATTTGGGTTGATTGAATTTTTATTTATTTTCATTGGCTGGTGGTTTATTTTTCAAAGAGATCGAAGGCCAGCGTCAATTGAAGAAGAAGGTTATCGAAGGATATCCGATCACTTCAGAAAATTCACATACAAAGAGCTTAAACAGGCAACTTCAAGTTTCAGTGAGGAACTCGGAAGAGGAGGATCAGGGTCTGTTTATAAAGGTGTTTTAAAAGATAAGAGAATAGTAGCTGTTAAGAAACTGAAAGATGTAATACAAGGGGAAGATGAGTTTTGGGCTGAAGTAAGCGTGATAGGTAGAATTTACCATATGAATCTGGTAAGAATGTGGGGCTTTTGCTCGGAAAGTTCTCACAAAATCTTAGTATATGAGCATGTCCAGAATGGATCGTTAGATAAGCATATATTTGATGATAACAAAAGAATACTCGACTGGAATGAGAGGTTTAAGATTGTACTTGGTGTAGCAAAAGCATTAGCATACCTACACCATGAGTGCCTCGAGTGGATTGTTCATTGTGATGTAAAGCCAGAAAATATACTTTTGGACGAAAGTTTTGAGCCTAAGGTTGCAGACTTTGGATTAGCAAAACTATCAAAGAGAAGTTTTAATGATATGAATGTTTCACAAATAAGAGGAACAAGGGGTTACATGGCACCCGAATGGGCTTCAAATCTTCCAATTACTGCAAAAATTGATGTCTATAGCTATGGAATAGTGCTTTTAGAGATTGTGAAGGGAAGTAGAATTGGAGAGGATGAAAATGTTGATCTTTTGACACTCGTTAGGATATTAAAGGAAAAAATTGAGGCCGAATCAGCATCATGGATTGAAAATTTTGTTGATCACAAATTGAATAATACGTATAGCAGGAAGCAAGTGTTAGTGTTAATTAAGATTGCAGTGTCATGCTTAGAAGAAGATCGAAACAGAAGACCGTCTATGCATCAAGTTGTTCACATGATCATGCAATGTAAGAGTGAGACCAAATTTCCCAATTAGCAATAAAATGTCAATACAAGATTCATGAATTCCAATAAAAGAATATCCAAAATTATGTATATTGTACAAATTTCTTAGTTTTATCTGTATAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020277069.1	4.4e-276	putative receptor protein kinase ZmPK1 isoform X3
Swissprot	P17801.2	4.6e-198	Putative receptor protein kinase ZmPK1
trEMBL	A0A6I9R4V7	8.0e-272	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34300.1	32.95	2e-102	370		lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G04750	AT1G34300.1	789	448	26	32	787	25	765	32.95	2e-102	370
AfisC7G04750	AT4G32300.1	780	435	21	41	777	40	764	31.67	2e-91	333
AfisC7G04750	AT4G00340.1	774	462	21	42	777	26	759	30.23	1e-87	321

Ortholog group

Species	Genes
Allium cepa	g129104.t1
Allium fistulosum	AfisC7G04750
Allium sativum	Asa3G01249.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g47840.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	81	170	85.1	2.8e-24
PF00954.17	S_locus_glycop	Domain	241	310	48.3	1.1e-12
PF00069.22	Pkinase	Domain	509	775	180.9	2.7e-53

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005488	F	binding
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network