result

Gene information

Detail information of AfisC7G04848

Location

Gene	Chr	Start	End	Strand
AfisC7G04848	chr7	890341751	890345669	-

Sequences

CDS

>AfisC7G04848
ATGAATTTGCTCGCAGAAAGAATCTCTTTACAGGCACAACAACAGTCAACACTGAGAAGTAACAGCAATCAACTCCTCCTCTTCGGCAAACCAGCTCATAATGTGAAAGATGCATCACTAGCAGCGAACAAATCAATGGCAGAAAAATGTTTAGATTCTCAGCTATGGCACGCATGTGCAGGAGGTATGGTTCAAATGCCCTCCTCTAATTCGAAGGTATACTACTTCCCTCAGGGACATGCAGAGCACTCTCAGTCTCCTATTGATTTCGGAGCTCCAAGAATTCCCTCCATCCTCTGCCGTGTCGTCTCAGTCAAATTTTTAGCAGATCCAGAAACAGACGAAGTCTTTGCCAAGATCCTCCTCGTACCAGAAGCAGAATTTGGTGAGGAAGATCATAATGATATAGGATTGGAGTTGCAAGAAAAGCCAGCTTCATTTGCAAAGACTTTGACGCAGTCAGATGCTAACAATGGTGGAGGTTTTTCTGTGCCAAGGTACTGCGCAGAGACAATATTTCCTAAACTGGACTACACAGCAGATCCTCCTGTTCAGACTGTGCTAGCGAAAGATGTGCATGGAGAGGTATGGAAGTTTAGGCATATTTATAGGGGTACCCCTAGGAGGCACTTGCTGACTACTGGGTGGAGCACTTTTGTGAATCAAAAGAAGCTCGTGGCTGGGGATTCGATCGTCTTTTTACGTGCTGCGAACGGAGATTTGTGTGTAGGGATAAGGAGGGCAAAACGAGGAGTTGGATGTGGGCCAGAGCAGCCTTCTGGGTGGAACCCGCCACCCACTTATGGAAGAGGGTTGTCTGTGTTTTTGAGAGAAGAAGAAAATGGTAATAGTAGAAATAGGGGTAGTGGTGGAAATATGAAAGGGAAGAGTAAGGTAAGGAGTGAGTCAGTGATTGAGGCAGCTAGACTTGCTGCCAATGGTCAGGCTTTTGAGGTGGTGTACTATCCTAGGGCAAGCACACCTGAGTTTTGTGTTAAGGCAGGTGCGGTTAGAGGGGCCATGAGGGTTCAGTGGTGCCCGGGTATGAGGTTTAAGATGGCTTTTGAGACGGAAGATTCTTCAAGGATTAGCTGGTTTATGGGTACTGTTTCTTCTGTTAGTGCTACTGATCCTGTTCATTGGCCTAATTCTCCTTGGAGACTTCTTCAGGTGACATGGGATGAGCCTGACCTGCTTCAAAACGTTAAGCGGGTTAGTCCATGGCTAGTAGAACTAGTTTCGAACATGCCAACTATACATTTATCTCCATTCTCTCCACCACAACCGAGGAAGAAGCTGCGTTTTCCACCCAACTCTGAATATACTCATGACACCCACCAATTCTCACAGTTACCACCCACCTTCACTACAAACCCCCATGGGCCCTACGTGGGCATACAGGGAGCCAGGCATGCTCATTACAGTGGTGTTGGTGGTGGCAGCAGCAGCAGCAGCAACAATACTGTTTTCTCTCTTCCAGATCTCCATTTTAAGAAACTTCAATCTGGGTTTTTTCATGCAAGGCTTGAATCTAAACCTAAGCTCATAGAAGACGATAACATATCTTGCTTACTGAGTATAGGAAGCCCTGCCACATGTGTTAGCGTGAAAAAAGCGACTCAGTTGGTCCTTTTTGGGCAGCCAATACTGACTGAAGAGCAGATATCTCTTAGCAGTGGTTCAAGGAACAGTTCTTCTGAATCCATGGCTTCCAGGGTGGAGGCTGGACAGTGCAAGGTGTTCAAAGAACCTGATGATGTTGGTGTGAATATTGATCTTTCTATGTTTGAATCTTATGATGAGTTATATGGCAAGTTAGCTGACATGTTTGGAGTTGAGAAGAGGGAGATCGTTAGTCGTTTCTGCTATCATGATACCAATGGTTCAGTTAAACATGCGACGGATGCACCTTTCAGCGAGTTCGTCAAAACAGCAAGCAGGTTGACTATACTCATGGAGTAG

Protein

Gene

>AfisC7G04848
CGTAGATAAATGTCGTAGCTACAGACAAATTTTTTGGGGCAAGAGTTGTAACCAGCGAAGGTAGGTCGTCCATTTTCTATTTATTTCCATTTCCTTCATGTTTTTTCCCTTTTATCCTTTTAGTAATGGTTACATTCAAACATTGCACCATAAATAAAAACTACACAAAACCAGCCATAGCACTTATCTACTTTTAAACTAACATCGCTTTTAATCCCTCCTTCTTTATATATATAAAAAAGTCAAAATCTGCATATACAATGCAATTTGGTTAATCAAATATGTTATTTACATTATATAATTGGTTAATGAAAAGCTGGAGAAAAGTATCGATTTAAAATCTCGACATTATGAAGTACGTAGCTTGCAATAGCGGTAATAACATAGCTGTCCAAATTGGCTGCTTTTGTGAAACGCACACTTCTGTACTGTCACTATAATACAAGTCTACCCCAACTTAACTTGTATTTTTTTTGTTTTTTTCTCAATTTAACTTTATTTATTAATTAACAACCCCCTTTGTTTCTGGAATTTATTTATTTAAATATCTATTTGCATCTTCCTCTCTATATATTTCTGCAATTAATTTATTTTAGTGTATCTTCGCAAAAGAAAAATAAAAAAGAAAGTACAGAAACTTGTTTCCATTTTCTTCCCATTTCGTTTTGGGGTTATCTTCTTGTACTATATTTCCACTACTCCTTGGCTTTCTACTTGGATCTCCTGCTCAATTTTCCCTTTCAAAATTTGTTGTTCGGAATCAATGGCCATTACCTGCTTCCGAAGCTGATTCCTCTCTTCCCTCAAACCATGAAGATTTTTCCTCTCTTAGCTCTCTATCTACTCTAGAGGTAGATTGCGAAGTGCTGCTGCGAGTTGAGAATCTATTCGGCTTCGCAGATTCAAATCATCAACTTAGCGCCTTTTGATTTTTGATATAAAATAAGGTATGCTTTTTTCTTCAACATATTTCTCCTTTGCTTCCAATTTAATGTAATCGAATTCCTTGTTGACATTTTATCATGCATCTTTTATGCAGTAATCCCTTGTAAACAATGAATTTGCTCGCAGAAAGGTAACACGCAAATCACCACTTCTCTGCATTTTACAGTAATTCATCCAATATCCAAATCGAAATAATATCGTATAAACGTGTGAATACAGAATCTCTTTACAGGCACAACAACAGTCAACACTGAGAAGTAACAGCAATCAACTCCTCCTCTTCGGCAAACCAGCTCATAATGTGAAAGATGCATCACTAGCAGCGAACAAATCAATGGCAGAAAAATGTTTAGATTCTCAGCTATGGCACGCATGTGCAGGAGGTATGGTTCAAATGCCCTCCTCTAATTCGAAGGTATACTACTTCCCTCAGGGACATGCAGAGCACTCTCAGTCTCCTATTGATTTCGGAGCTCCAAGAATTCCCTCCATCCTCTGCCGTGTCGTCTCAGTCAAATTTTTAGCAGATCCAGAAACAGACGAAGTCTTTGCCAAGATCCTCCTCGTACCAGAAGCAGAATTTGGTGAGGAAGATCATAATGATATAGGATTGGAGTTGCAAGAAAAGCCAGCTTCATTTGCAAAGACTTTGACGCAGTCAGATGCTAACAATGGTGGAGGTTTTTCTGTGCCAAGGTACTGCGCAGAGACAATATTTCCTAAACTGGACTACACAGCAGATCCTCCTGTTCAGACTGTGCTAGCGAAAGATGTGCATGGAGAGGTATGGAAGTTTAGGCATATTTATAGGGGTACCCCTAGGAGGCACTTGCTGACTACTGGGTGGAGCACTTTTGTGAATCAAAAGAAGCTCGTGGCTGGGGATTCGATCGTCTTTTTACGTGCTGCGAACGGAGATTTGTGTGTAGGGATAAGGAGGGCAAAACGAGGAGTTGGATGTGGGCCAGAGCAGCCTTCTGGGTGGAACCCGCCACCCACTTATGGAAGAGGGTTGTCTGTGTTTTTGAGAGAAGAAGAAAATGGTAATAGTAGAAATAGGGGTAGTGGTGGAAATATGAAAGGGAAGAGTAAGGTAAGGAGTGAGTCAGTGATTGAGGCAGCTAGACTTGCTGCCAATGGTCAGGCTTTTGAGGTGGTGTACTATCCTAGGGCAAGCACACCTGAGTTTTGTGTTAAGGCAGGTGCGGTTAGAGGGGCCATGAGGGTTCAGTGGTGCCCGGGTATGAGGTTTAAGATGGCTTTTGAGACGGAAGATTCTTCAAGGATTAGCTGGTTTATGGGTACTGTTTCTTCTGTTAGTGCTACTGATCCTGTTCATTGGCCTAATTCTCCTTGGAGACTTCTTCAGGTAGTTTTACTTGGAGCCTACTTATCTACTATTTATTTTAAACCTCATTGAAAGAAGTTTTGACTAGTAAATTTGAATAGTTTTGAGTGAATAGTGAAAACTTGGAAGTGTTTGAATTTGCTTGTTTCTACTCAATTACTTATTTGATACAGTTAAGTCAAAAATTTTAATTTTCTACAAACACTAACTTGTAAGTTACTTCTGCTATTCATAAGTTAGTATCAAACACTGTTGGTTTTTTTGGCAGATTAAGTCACTTCCGGTTATTCAAAGAAATTTGCACATTCAGTAGAATCAATTGTTGTGCAAGGAAACATACTATTAGATTTACACTATGTATAGGTAATTAAGATTTTTGATTTGTAGGTGACATGGGATGAGCCTGACCTGCTTCAAAACGTTAAGCGGGTTAGTCCATGGCTAGTAGAACTAGTTTCGAACATGCCAACTATACATTTATCTCCATTCTCTCCACCACAACCGAGGAAGAAGCTGCGTTTTCCACCCAACTCTGAATATACTCATGACACCCACCAATTCTCACAGTTACCACCCACCTTCACTACAAACCCCCATGGGCCCTACGTGGGCATACAGGGAGCCAGGCATGCTCATTACAGTGGTGTTGGTGGTGGCAGCAGCAGCAGCAGCAACAATACTGTTTTCTCTCTTCCAGATCTCCATTTTAAGAAACTTCAATCTGGGTTTTTTCATGCAAGGCTTGAATCTAAACCTAAGCTCATAGAAGACGATAACATATCTTGCTTACTGAGTATAGGAAGCCCTGCCACATGTGTTAGCGTGAAAAAAGCGACTCAGTTGGTCCTTTTTGGGCAGCCAATACTGACTGAAGAGCAGATATCTCTTAGCAGTGGTTCAAGGAACAGTTCTTCTGAATCCATGGCTTCCAGGGTGGAGGCTGGACAGTGCAAGGTGTTCAAAGAACCTGATGATGTTGGTGTGAATATTGATCTTTCTATGTTTGAATCTTATGATGAGTTATATGGCAAGTTAGCTGACATGTTTGGAGTTGAGAAGAGGGAGATCGTTAGTCGTTTCTGCTATCATGATACCAATGGTTCAGTTAAACATGCGACGGATGCACCTTTCAGGCAAGTTCTACTTATAGATTGAAATTTTGTCAGTTCATACAGCGACCTTGTTATGCTAACTTTGTTCTGAATTTGTTTCAGCGAGTTCGTCAAAACAGCAAGCAGGTTGACTATACTCATGGAGTAGAGAACAGGAAAGCATGTGAGCTAAGTATATTTTTAAGCATGTGAGCCAAGTATAATTTTCAAATCCAATAAGTAATGTGCGTTTGAAGAAAGGTTACTTAGCGTTTTGTTAGCTTTGTTAGGCTAATTCCATGGAGAGAGGAAAAAAAAAACCTCCGTACTATATGTTTTGTATTTGTTTGAAATGTGTATGCCAAATGGCTATAAAAGAAGGCTTGTATTCACTATTCAGACATATTTAGTTGTGGTAATGATGTTGAATTCCAGCATTCTCAAAGACATCTTTGTTTTGTTGTTTGTTTCCCTTGAATAAAGTATGTCGTGATGTATAATGTTTGAAAAATACTTGCGAGTCTTGGATTTTTAC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020259737.1	6.9e-243	auxin response factor 18-like isoform X1
Swissprot	Q9AV47.1	2.1e-196	Auxin response factor 22
trEMBL	A0A5P1EYY5	4.9e-243	Auxin response factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G28350.1	56.20	0.0	667	ARF10	auxin response factor 10

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G04848	AT4G30080.1	674	216	19	44	653	9	662	55.49	0.0	667
AfisC7G04848	AT2G28350.1	669	217	15	48	653	4	659	56.20	0.0	667
AfisC7G04848	AT1G77850.1	546	283	15	41	554	6	536	39.56	8e-97	351

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02362.18	B3	Family	147	248	75.1	2.8e-21
PF06507.10	Auxin_resp	Family	307	390	113.5	3.6e-33

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0009653	P	anatomical structure morphogenesis
GO:0007389	P	pattern specification process
GO:0009555	P	pollen development
GO:0009734	P	auxin-activated signaling pathway
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009743	P	response to carbohydrate
GO:0010154	P	fruit development
GO:0031540	P	regulation of anthocyanin biosynthetic process
GO:0045229	P	external encapsulating structure organization
GO:0048366	P	leaf development
GO:0048441	P	petal development
GO:0048442	P	sepal development
GO:0048589	P	developmental growth
GO:0048829	P	root cap development
GO:0051301	P	cell division

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14486	K14486, ARF; auxin response factor	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network