result

Gene information

Detail information of AfisC7G04852

Location

Gene	Chr	Start	End	Strand
AfisC7G04852	chr7	890968179	890969640	+

Sequences

CDS

Protein

Gene

>AfisC7G04852
ATGTCATTCGTGGGCACCCACGAGTACTTGGCGCCCCAAATCATAAGAGGCGAAGGCCATGGCAGCGCAGTCGACTGGTGGAGTCTTGGAATATTTTTGTATGAGCTTTATTTCGGTAAAACCCCTTTCAAAGGATCTAGAAATAGGGCGACCTTGTTCAACGTGGTAGGACAACCACTTAGGTTTCCTGAATCTCCTTCGGTTAGTTTTGAACCTACAATATTTTTGATAACATTTTGCATTTTCATAATAAGATAGATAAATTGGCTAGATAATGTTAAAGAAATTTCATAATAGGAAAAAAATCAGCAAAGCTTTCATCTTCACTAAATATTTCAACATTTGGAGAAAAAAGTTGCATTGTTCATAAGAAAGATGGAGGTGATAATACTTGCACATACATGATATTACTACCAGCTAAAAGATTATGTACTAGCTAAGTTGTTGTATTTCGGTGTTTAAGAACCAAAATGTTCTTGTGTTTAATATGGTTTAATTGAATTTCAGAGGACTAACGGGTTAAAATTGTCAGTTTCTACAATGTGGTAAAGTTAACACTGCTAGATGTGTTGCAGGCTCATTTTTCTGTATTATTAATATATGAACTTGAAAAAACAGTACATGTTTTAGAAACATATAAATATACACATCGAATAGGACATAAATATACAATCATAGAAATTTGGTTAGAGGACTCAAAATTATTTTATTATTTTGTTAATTTGAATACGGTATACATGTTAAAATCCACATATTTTAATGATTTATTAAATAAATTAACATCTAACTGATTTGTTTAAGTATTTTAAGCTCAAAATTATGTAATTAGTCGAAATATTCGAGTCTAAAGGTAAATAGTAAAAAGAATTGAGAATGGTTTTGTAAAAAGCTACAGAAATATTAATGCTTAATTGTTTGAAGTTAAAATCGAAATTTTTTTAATGCAATGTATGTTAAATTTTTGCGGAAAATGTATGATAAAACAGAATTTTGTGCATATCTGTGTATTGAAATTGGCATATATTTTTGGGGATTAATTAGAAGAATATATTGAATATTTATAAAGATTATTTTAATAGTTTAAATATATGATTTCGTTAGTAGTTCAATTATATGGATTTAAATATAAAATATTAGTAAAGAGTTGAGAGGGTCTGAACAATTGTAGAAATGTTATAAATATATGATTTCGTTAGTAGCTCTTTTGTCGCTTGCTTATTGATATACTCACATATTGTACGCTTTGTTCAAGCAGCTTTCCCCCGAGAACAATGGAATAGAATTCTGAACATATTAAACTAATTACTTATAGTGTTTTTAAACTACAGCATTCTGGTAAAGCCCATACTTGTTCATGATGTTGTACCAGGAGGGGCAAGTTTTTGAAAACATCAAAAACCATTTGCTGTGTGCTCTTAAGTATGTGAACCAGATGATGCATGCTCCTTGTAAAGCAAAGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	GAV59665.1	1.2e-29	Pkinase domain-containing protein
Swissprot	Q9FG74.1	1.6e-31	Serine/threonine-protein kinase AtPK64
trEMBL	A0A1Q3AVF6	8.4e-30	Pkinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G26610.1	90.91	2e-32	134	AGC1-2;D6PKL1	D6 protein kinase like 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G04852	AT5G55910.1	66	6	1	66	344	409	90.91	2e-32	134
AfisC7G04852	AT4G26610.1	66	6	1	66	354	419	90.91	2e-32	134
AfisC7G04852	AT5G47750.1	66	9	1	66	425	490	86.36	2e-31	130

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	2	58	56.4	2.6e-15

Gene Ontology

Accession	Ontology	Name
GO:0000155	F	phosphorelay sensor kinase activity
GO:0000160	P	phosphorelay signal transduction system
GO:0004674	F	protein serine/threonine kinase activity
GO:0005198	F	structural molecule activity
GO:0005524	F	ATP binding
GO:0005525	F	GTP binding
GO:0005730	C	nucleolus
GO:0005874	C	microtubule
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006468	P	protein phosphorylation
GO:0007018	P	microtubule-based movement
GO:0008728	F	GTP diphosphokinase activity
GO:0008893	F	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
GO:0009507	C	chloroplast
GO:0009734	P	auxin-activated signaling pathway
GO:0009860	P	pollen tube growth
GO:0009882	F	blue light photoreceptor activity
GO:0009908	P	flower development
GO:0009925	C	basal plasma membrane
GO:0010150	P	leaf senescence
GO:0010540	P	basipetal auxin transport
GO:0015970	P	guanosine tetraphosphate biosynthetic process
GO:0015979	P	photosynthesis
GO:0019901	F	protein kinase binding
GO:0042594	P	response to starvation
GO:0048766	P	root hair initiation
GO:0048825	P	cotyledon development
GO:0080147	P	root hair cell development
GO:1901981	F	phosphatidylinositol phosphate binding
GO:2000012	P	regulation of auxin polar transport
GO:2000114	P	regulation of establishment of cell polarity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network