Detail information of AfisC7G05256


Location
GeneChrStartEndStrand
AfisC7G05256chr7957761097957787687+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263723.15.1e-135protein SAWADEE HOMEODOMAIN HOMOLOG 2
SwissprotQ8RWJ7.12.8e-98Probable DNA-binding transcription factor 2
trEMBLA0A5P1FAU83.7e-135Homeobox domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G18380.157.966e-102 367DTF2;SHH2sequence-specific DNA binding transcription factors;sequence-specific DNA binding

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag183282.t1; g183291.t1
Allium fistulosumAfisC7G05256
Allium sativumAsa3G00897.1
Arabidopsis thalianaAT3G18380.1; AT3G18380.2; AT3G18380.3
Oryza sativaLOC_Os06g29020.1; LOC_Os06g29020.2; LOC_Os06g29020.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain137528.58.8e-07
PF16719.2SAWADEEDomain118245138.61.2e-40

Gene Ontology
AccessionOntologyName
GO:0005488Fbinding
GO:0005634Cnucleus
GO:0006306PDNA methylation
GO:0006346Pmethylation-dependent chromatin silencing
GO:0031047Pgene silencing by RNA

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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