result

Gene information

Detail information of AfisC7G05282

Location

Gene	Chr	Start	End	Strand
AfisC7G05282	chr7	962349884	962353604	+

Sequences

CDS

>AfisC7G05282
ATGTCCCAGATTTTACTATTTTTGATCCTACTCCATATCATCCCTATAACAATTTCAGCTCCTTCAGATGAAACGATAAGTCTCACCAACTTCAAAGCTTCATTAATCCGACCCAGACCTGATCCACTTGAACAATGGTCCGTAACCTCCACTGTACAAACATGCAAATGGCCATTCGTACTATGCTCGGGTACCATTGTTGTTGGTATAAACCTAGGTGGACTAAACCTATCAGGCACGATCGACGTTGATAGTTTAACAAAAATAAGATTTATTCGTACAATTTCTCTCGTTAACAACGGTTTTTCAGGACCTATCCCTCCTTTTTCCAAACTAGAAACCTTAAGATCACTTTACCTCTCCAACAACCAATTTTCAGGGCCTATACCCGATGACTTCTTCAACCATTTGGACCATTTGAAGAGATTGGAGCTTGATGGAAATGCATTTACCGGATCAATACCTAGCTCATTATCAAAAGTGGCTACTCTTTTAAAGCTAAAGCTTGAAGACAACAAATTTGAAGGGGCCTTGCCTGATTTGAACATTCCTTCTCTTATTGAATTCAATGTGTCCAATAATCAACTTACAGGAGCAATTCCTGATGGATTAGCAAAAAAATTCAAGATAGAATCTTTTAAGGGAAACCCTAACCTCTGTGGCCAGCCTCTTAATACTCCTTGTGATGCTGCACAGATTCAGAGTAATCCGAGTACTACTCCGGCTCAACCTCCACCCGAGGACGAGAGTAATAAAGGAAAAGGGAAAACATTTGTTCTTATGATTGCTGGCTTGGTAATAATTATTGGGATATTTGTTGGGTTATCTATAGCCAAAAACAACAAAAATGATCCTGACTTTGATAAGTACAGCATCGAGGCAGATTCAGAGGCTATTGAAGCAGTGGCGGCAGTAGAGTCTTCGCAGAAGCAAATTTCTGGTGATGGTTCATCTCATAAGCGAAGTGGGTCCAATCGAGGATCATCTGCAAAAAAGAGTGGTGGGGCAGACTTAGTTATAGTGAACGAGGACAAGGGCATGTTCGGTGTCAACGATCTTATGAAGGCGGCAGCAGAAGTGTTGGGAAACGGAGGTTTAGGATCCGCATACAAAGTTGTAATGCCTAACGGTACAGGACTGGCAGTAAAGAGAATGAGAGACATGAACAAAGCATCAAAGGAGGTGTTCGATGCAGAGATGAAGAGGTATGGCAAGTTCAGGCACAGGAACGTATTGCCGCCACTCGCTTACCTCTACAGAAAGGAGGAGAAGCTAGTCGTTTCGGAGTACATAAGCAAAGGGAGCTTACTGTACATTCTTCACGGTGACCGAGGTACGGATCATGCAGCACTAAACTGGTCGATTCGTCTAAAGATTATCCTCGGAATTGTAAGGGGAATGACCTTCTTACACACTGAACTTGCCTCTTCAGTAGAAGTACCTCATGGAAACCTTAAATCAGGAAACATCCTCCTTGCATCGGACTTTGAACCGTTAATCGTTGACTATGGATTTTTTAACCTAGTCAACCCTGCACAAGCTATGCATGCTATGTTTGCGTACAAATCTCCTGAAGCAAGTAGTACGCAGCAAGTGTCACCCAAATCTGATATTTTCTGCTTAGGTGTAGTGATTCTGGAAATATTAACAGGGAAGTTTCCATCGCAGTATCTGAACAATACCAAAGGAGGTACAGATGTGGTGAAGTGGACAGAGGGAGCAATTGCGGAGAATAAGGAGTCAGAGTTACTTGATCCAGATATGTTGGCTGGGAGAAATGCTACAGATGACATGGTTGAGTTGTTAAGGTTGGGTGGTGCATGTGTGAGTGAGGACCCAGAGGCAAGGCCGGAGTTGAATGAGGCGTTGAAGACTGTAGAGGATGTGATGAAGAGAAATGTAGCTTTGGTTCAGACGGAAAGTCAAGGATCAAGGATGGGTAGGATGGGAAGTACGAATCAGAGAGCAAGTCTGAAGAGGATAGAGAGTTCAGCAGGGCATGGGTCTGCCAGAAAAAATGTTGAGAGTTTGATTTGA

Protein

Gene

>AfisC7G05282
AAAAAAAAAAAGTTTGTAGAAAAAACAAAGAAAGAAAAACACATGAAAAGAAAGAGATAGAGGGGAAGGGATGATAAGGTAGAGAGCTATTAGCAAAGCGAAACCAAGAGAAGAAGATAAAAGAAAGCATCCACAACAAATATCAGAAAAACAAATGAAGAAAATGCATGTAGCATTGTAGTTGTCAATCTACTTCAGATTGAAAGAAAAAATGTCCCAGATTTTACTATTTTTGATCCTACTCCATATCATCCCTATAACAATTTCAGCTCCTTCAGATGAAACGATAAGTCTCACCAACTTCAAAGCTTCATTAATCCGACCCAGACCTGATCCACTTGAACAATGGTCCGTAACCTCCACTGTACAAACATGCAAATGGCCATTCGTACTATGCTCGGGTACCATTGTTGTTGGTATAAACCTAGGTGGACTAAACCTATCAGGCACGATCGACGTTGATAGTTTAACAAAAATAAGATTTATTCGTACAATTTCTCTCGTTAACAACGGTTTTTCAGGACCTATCCCTCCTTTTTCCAAACTAGAAACCTTAAGATCACTTTACCTCTCCAACAACCAATTTTCAGGGCCTATACCCGATGACTTCTTCAACCATTTGGACCATTTGAAGAGATTGGAGCTTGATGGAAATGCATTTACCGGATCAATACCTAGCTCATTATCAAAAGTGGCTACTCTTTTAAAGCTAAAGCTTGAAGACAACAAATTTGAAGGGGCCTTGCCTGATTTGAACATTCCTTCTCTTATTGAATTCAATGTGTCCAATAATCAACTTACAGGAGCAATTCCTGATGGATTAGCAAAAAAATTCAAGATAGAATCTTTTAAGGGAAACCCTAACCTCTGTGGCCAGCCTCTTAATACTCCTTGTGATGCTGCACAGATTCAGAGTAATCCGAGTACTACTCCGGCTCAACCTCCACCCGAGGACGAGAGTAATAAAGGAAAAGGGAAAACATTTGTTCTTATGATTGCTGGCTTGGTAATAATTATTGGGATATTTGTTGGGTTATCTATAGCCAAAAACAACAAAAATGATCCTGACTTTGATAAGTACAGCATCGAGGCAGATTCAGAGGCTATTGAAGCAGTGGCGGCAGTAGAGTCTTCGCAGAAGCAAATTTCTGGTGATGGTTCATCTCATAAGCGAAGTGGGTCCAATCGAGGTAGAGATAGATAAAGTAGTATGATAGCTTAATGATAATCAGTTTCGATGATTGTAGGCATATATTAGGATTCTGTGCATGTTTACATGCACAAAGTACGCATGACAATTGACAAACTCAGACCATCACCAGTAACGATGATTCAAGGTCCAACTTTTCCAGCTTTGCCATGCTCCAACATTATCAGTTTGAGCATGGCACAACAAAGAAAGTTGGTTTAATTCCATTTTATTATGAAAATAGAGCGCTAAATGGTTTTTTGAGAATGTTCAGCAAATGTTTAAGCCCTAGAAAGTTTTTGAAAACCATTTAACAAAAAATAGAATTCAGAAAACTCATTTAGCACACTATTTTGAAATCCCTTCAGCGATAAATGGTTTTTATAAAACTAATGACTCATTTGGTTTCATTTTGAGTTGTGTTTTTTGCAACATTCATTACAAAATATGAAGAGAGAGGGGGAGAAGAATTAAAATCCTAAGTCATTATGACGATGATGGAGGGACGACGAAAGGGATGGAGGGGACGACAAAAAGGATGGAGGGACGACGGACAGATGAATTGTTTTCCGTGTTTTTGTTATTTCCCAAAACACGGAAAATAAAATAAATTTGTTTTATATTTTGTATGCTAACTTCATTTTACATGTTGGTTGTTTTTCAAAAAATACATGAGTTGTGCGCATTTTTGTTTGAACGAAAATCCAAAATTAAAAATTAAAAACCAAACGGGGTCTAACTTAGCGCCAAACAAGTTTAAAACCTGTTTAGTAGAGTAAACAATTTTCTTTTTTTTCAAAAAAGCACTCAAAAGTGAGAAAATATTCACCTGTGGTGCTAGATAAGTTGGAGTAGTCCACACTTTTCGGGCTTCTGTTATGTCCAAATCTTCTCCTCCTCCGAGATGCTCTAAATGAAAAAAAGTTTTTGGCACGTGATAAATATAAACACAAAATTATCTTTTATTCATTTCTCATTAACAGGATCATCTGCAAAAAAGAGTGGTGGGGCAGACTTAGTTATAGTGAACGAGGACAAGGGCATGTTCGGTGTCAACGATCTTATGAAGGCGGCAGCAGAAGTGTTGGGAAACGGAGGTTTAGGATCCGCATACAAAGTTGTAATGCCTAACGGTACAGGACTGGCAGTAAAGAGAATGAGAGACATGAACAAAGCATCAAAGGAGGTGTTCGATGCAGAGATGAAGAGGTATGGCAAGTTCAGGCACAGGAACGTATTGCCGCCACTCGCTTACCTCTACAGAAAGGAGGAGAAGCTAGTCGTTTCGGAGTACATAAGCAAAGGGAGCTTACTGTACATTCTTCACGGTAAGCCCTTCAAATTGCCTATTATCGAGTTTTCTACATACCAACATGAGAATGCTAATATACACAGGTGACCGAGGTACGGATCATGCAGCACTAAACTGGTCGATTCGTCTAAAGATTATCCTCGGAATTGTAAGGGGAATGACCTTCTTACACACTGAACTTGCCTCTTCAGTAGAAGTACCTCATGGAAACCTTAAATCAGGAAACATCCTCCTTGCATCGGACTTTGAACCGTTAATCGTTGACTATGGATTTTTTAACCTAGTCAACCCTGCACAAGCTATGCATGCTATGTTTGCGTACAAATCTCCTGAAGCAAGTAGTACGCAGCAAGTGTCACCCAAATCTGATATTTTCTGCTTAGGTGTAGTGATTCTGGAAATATTAACAGGGAAGTTTCCATCGCAGTATCTGAACAATACCAAAGGAGGTACAGATGTGGTGAAGTGGACAGAGGGAGCAATTGCGGAGAATAAGGAGTCAGAGTTACTTGATCCAGATATGTTGGCTGGGAGAAATGCTACAGATGACATGGTTGAGTTGTTAAGGTTGGGTGGTGCATGTGTGAGTGAGGACCCAGAGGCAAGGCCGGAGTTGAATGAGGCGTTGAAGACTGTAGAGGATGTGATGAAGAGAAATGTAGCTTTGGTTCAGACGGAAAGTCAAGGATCAAGGATGGGTAGGATGGGAAGTACGAATCAGAGAGCAAGTCTGAAGAGGATAGAGAGTTCAGCAGGGCATGGGTCTGCCAGAAAAAATGTTGAGAGTTTGATTTGAATAGGTGGATCCTGACAGTTTTCCTCACGAAAACATCGTTAGATTTGCATATATACAATTGAATCAAGGCTAGAAGTTATAGATTTATTAGTAAAATTGAGGTAACACGAGATTTTCTTGACTAGGTTAGATCAATGTGATATAAGTAGATTGCCATTAAGTTATTCGGTGTATGTATAATGAGGTATCACAAGATAGATAGCAAACATAATGTACAAATTTATACTAAAGAAGGGTTTTTTATTCTTGCGAGGGCAGTGTGATATAATTTCTTTACCAATATGTAAATGGGAATTCCTTTCTGAAAATATGAAAATTATATATGTGTGTGTGTGCACACACATTAAAGCCCCCTTGATTTCAACCACACGTTCCAATTTAAATAATTATAGTCTCTTTCTTATCACTTCTTCCTGTTACTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_023537808.1	7.1e-126	pollen receptor-like kinase 3
Swissprot	Q9M1L7.1	2.3e-105	Pollen receptor-like kinase 3
trEMBL	A0A5D3CFY4	8.8e-126	Pollen receptor-like kinase 3

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G42880.1	46.05	7e-154	541	PRK3	Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G05282	AT3G42880.1	645	318	13	1	629	1	631	46.05	7e-154	541
AfisC7G05282	AT5G20690.1	631	319	8	24	629	30	657	45.01	1e-149	526
AfisC7G05282	AT2G07040.1	639	363	15	2	631	3	614	37.56	3e-115	412

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	22	63	22.7	8.1e-05
PF13855.3	LRR_8	Repeat	114	174	32.3	5.4e-08
PF00069.22	Pkinase	Domain	359	624	98.8	2.9e-28

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004674	F	protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0009505	C	plant-type cell wall
GO:0009506	C	plasmodesma
GO:0009610	P	response to symbiotic fungus
GO:0009737	P	response to abscisic acid
GO:0022626	C	cytosolic ribosome
GO:0031090	C	organelle membrane
GO:0044446	C	intracellular organelle part
GO:0044707	P	single-multicellular organism process
GO:0045177	C	apical part of cell
GO:0080092	P	regulation of pollen tube growth
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network