result

Gene information

Detail information of AfisC7G05605

Location

Gene	Chr	Start	End	Strand
AfisC7G05605	chr7	1011225859	1011228056	-

Sequences

CDS

>AfisC7G05605
ATGACCCCGAAAACCCCATTATTCTCTATCTCATTCCTCCGCCACCTCTCCACGAAGCATATCATCATTCCGACCCCACCATCTCTAAAGAACATATCCCGTGGCCACCACCGCAGGCAAGCCCTAACCGCCGCCAGAGTCGCTCTGATCGACTACCTCCACTTCACCCGCAGCCTCCCCTTCTCCCTTTCCGATCAAATCATCTCCAACTCCCCTTCCTCCCTCTCTTCCTTCCTCTCCCTCATCCCCTTTCCCTCCGACGCCACCCCATCTGACTATCCCTCTTTCATCCGCCGCTTCCTCTCCTACCATCCAATCGACGAGATCGAATTCTTCTCCGAATCCATCGGCCTTCACCCACCGTCGTCGATCGGAGGCAGCAAAAGTCCGTTTCTCTCCGACAACCTTGGACTGGTCCAAACCGCGTTGATGCTGGTCAGATTTGGCTTTCCTTTTCAGAAACTGGGTTTGCTCCATCAGGTACTTAAACAAGATGAAAATGAGTTGATTCCGAGGTTGAATTTGTTAGAGGCGTTAGGGCTTAGGCGTGTTTTGGTGATTGGTGCATGTCTTGCGTTTCCCTGGGTTTTGAAAAGTAATGTGGGGGAAAAGGCAAAGTTGTTGTTTGAAGATTTGAGTTCGATTTTGTTGGATTATGAGATGAATGATGTGGATTTTGTGTTTGAAATGTGCAGGAAAGTAAGTTTGTTTTATGATAGCGGGGTGGAGATAGGGAAGATGGGGGAGGTAATGGGAAATAATAGACGGGTTTTTCTGCAGGTCAAGGAGGAAGATTTGAGAAGGAATTTGGATTTTTTCGTGAAGTTGGGCATGAGGAAGAAGGACATGGGGATATTTGTTTTGAGTTTTGTGGATATTTTCAATATTGAGTTAAAGAGCATGGAAATTGTCGTGCCGGATGTTCTGGTAAAGCTTTTAAGTTTAGATGAAGATGAAATTGAAAAGATTGGGAAGATGTATCCTCATGTGATGGGGAGGAACGTTGCAGGGAATTTATTGGGGGTTTTGAAAGCTTTGGATTTAGATAGGCGATTAATTGATAAAATTACAAATATGGATTTTCATTGTTTGAAGGTTTTTTGCAATGAAGTTAACTTTAACTCGTGTGTTGATGATAATGATAGGGAAGAGGAAGATTTTTTAGAAAATATGAAGGTTATTAAGTCCAGACAAAAAGTTGAATATTTGGATAATAAGCTTGATTTTTTGTATAGTATCGGGTTTGGGAGGAATAAGATTACATCAAAGATTGTATCAGTATTAAAAGGCCCAATAGATCAATTGCAGGAGAGATTTGATTGCCTTATCAGATTTGGGATTGAGTACAGCAATGTTTGTAAAATGATAAGTGGTACCCCTACACTGTTAAATCAAAGCACAGACAGTATTCGTAAGAAAGCGAACTATCTTTGCGATGAATTGGGTTATCCATTAGATTTTTTAATTGATTGTCCATTCTATTTGTGTTTTGATTTGGAAAAGAGGATAAAGCCAAGATATGACATTATGAATTGGCTTAAAGAAATTGGATTTGTGAAAAAAACAATTTCTCCTGCAACTATACTTTCTAATGATGAAAAGAGGTTCATCATTTACCTCTACAAAATTCATCCAGCTGCTCCTAAACAATGGCTAGAGACTTTTTCATCGAGGAACCGTGTCACCTCGAATAAAACGTAA

Protein

Gene

>AfisC7G05605
TTACTACAAATATAAAATTTTAGATTCTTCATCCTCTAGCTCCACCATGGTGCATGGTTGTGATTTTTTCCTATAGTGGAGGTACGGGGTGAAAGACACAACCACGCAGCAATACTCCGTGCTTGTGATTTTTTCCTCGCAGTTGTGCTGCAGGATGAAAACCACATTGTCACAGTTTATATGCGTTGATGTGATTTTCCCCACTCGCAACTACTGCGGGTAAATCGTACAACTGCGATCACTGACTTTGATTCACGACGTTAAATTAGGGTTAGGATTAGCACTGCGACTTCGATTATAGATTAGAGTTAGATTTATCCGAGCTTGTGCATTCAATGTCGTGTCAAGTCCGTCATGTTGCTAGGGTTTGTTCATTATCGTTGATCTAGAAAAATACCGATCCACCACCATGCGTACATGACCCCGAAAACCCCATTATTCTCTATCTCATTCCTCCGCCACCTCTCCACGAAGCATATCATCATTCCGACCCCACCATCTCTAAAGAACATATCCCGTGGCCACCACCGCAGGCAAGCCCTAACCGCCGCCAGAGTCGCTCTGATCGACTACCTCCACTTCACCCGCAGCCTCCCCTTCTCCCTTTCCGATCAAATCATCTCCAACTCCCCTTCCTCCCTCTCTTCCTTCCTCTCCCTCATCCCCTTTCCCTCCGACGCCACCCCATCTGACTATCCCTCTTTCATCCGCCGCTTCCTCTCCTACCATCCAATCGACGAGATCGAATTCTTCTCCGAATCCATCGGCCTTCACCCACCGTCGTCGATCGGAGGCAGCAAAAGTCCGTTTCTCTCCGACAACCTTGGACTGGTCCAAACCGCGTTGATGCTGGTCAGATTTGGCTTTCCTTTTCAGAAACTGGGTTTGCTCCATCAGGTACTTAAACAAGATGAAAATGAGTTGATTCCGAGGTTGAATTTGTTAGAGGCGTTAGGGCTTAGGCGTGTTTTGGTGATTGGTGCATGTCTTGCGTTTCCCTGGGTTTTGAAAAGTAATGTGGGGGAAAAGGCAAAGTTGTTGTTTGAAGATTTGAGTTCGATTTTGTTGGATTATGAGATGAATGATGTGGATTTTGTGTTTGAAATGTGCAGGAAAGTAAGTTTGTTTTATGATAGCGGGGTGGAGATAGGGAAGATGGGGGAGGTAATGGGAAATAATAGACGGGTTTTTCTGCAGGTCAAGGAGGAAGATTTGAGAAGGAATTTGGATTTTTTCGTGAAGTTGGGCATGAGGAAGAAGGACATGGGGATATTTGTTTTGAGTTTTGTGGATATTTTCAATATTGAGTTAAAGAGCATGGAAATTGTCGTGCCGGATGTTCTGGTAAAGCTTTTAAGTTTAGATGAAGATGAAATTGAAAAGATTGGGAAGATGTATCCTCATGTGATGGGGAGGAACGTTGCAGGGAATTTATTGGGGGTTTTGAAAGCTTTGGATTTAGATAGGCGATTAATTGATAAAATTACAAATATGGATTTTCATTGTTTGAAGGTTTTTTGCAATGAAGTTAACTTTAACTCGTGTGTTGATGATAATGATAGGGAAGAGGAAGATTTTTTAGAAAATATGAAGGTTATTAAGTCCAGACAAAAAGTTGAATATTTGGATAATAAGCTTGATTTTTTGTATAGTATCGGGTTTGGGAGGAATAAGATTACATCAAAGATTGTATCAGTATTAAAAGGCCCAATAGATCAATTGCAGGAGAGATTTGATTGCCTTATCAGATTTGGGATTGAGTACAGCAATGTTTGTAAAATGATAAGTGGTACCCCTACACTGTTAAATCAAAGCACAGACAGTATTCGTAAGAAAGCGAACTATCTTTGCGATGAATTGGGTTATCCATTAGATTTTTTAATTGATTGTCCATTCTATTTGTGTTTTGATTTGGAAAAGAGGATAAAGCCAAGATATGACATTATGAATTGGCTTAAAGAAATTGGATTTGTGAAAAAAACAATTTCTCCTGCAACTATACTTTCTAATGATGAAAAGAGGTTCATCATTTACCTCTACAAAATTCATCCAGCTGCTCCTAAACAATGGCTAGAGACTTTTTCATCGAGGAACCGTGTCACCTCGAATAAAACGTAATGTAGACATCGAGGGTAACTTTGATTTCAAATTTCACATTTTTGAACTGATTCTTAAGCTGAAATAGGAAGAGAGATAAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010919664.1	1.6e-126	LOW QUALITY PROTEIN: transcription termination factor MTEF18, mitochondrial
Swissprot	Q9M219.1	8.2e-88	Protein SUPPRESSOR OF HOT1-4 1
trEMBL	A0A8B8ZPJ5	1.1e-126	transcription termination factor MTEF18, mitochondrial

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G60400.1	36.91	4e-91	332	SHOT1	Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G05605	AT3G60400.1	531	310	8	41	558	33	551	36.91	4e-91	332
AfisC7G05605	AT4G19650.1	547	273	15	65	551	90	567	26.51	2e-35	147
AfisC7G05605	AT5G06810.1	543	361	10	38	550	619	1131	22.47	2e-27	121

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	406	536	55.1	5.2e-15

Gene Ontology

Accession	Ontology	Name
GO:0005739	C	mitochondrion
GO:0007005	P	mitochondrion organization

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network