result

Gene information

Detail information of AfisC7G05707

Location

Gene	Chr	Start	End	Strand
AfisC7G05707	chr7	1030189206	1030190815	-

Sequences

CDS

Protein

Gene

>AfisC7G05707
ATGAGATCACCTTGTTGCAATGAATTTGAAGTGAAGAAAGGACCTTGGACTGCAGAAGAAGATAAACTATTAATCTATTATGTACAAGAACATGGGGTTGGCAGCTGGAGGAACATACCAAAAAAGGCAGGGCTCAAACGATGTGGAAAGAGTTGTAGATTACGTTGGACTAATTATCTTCGACCAGACATTAAAAGAGGGAAGTTCACTGAGGAGGAAGAAAAGCTTATCATCCACCTTCACCCAGTTTTAGGAAACAAGTAATCTTTTGTTCGATTTTCTTCACAAATCTTTATTGTCTTTCTTCATATGAGATTTTTTTTTTTTTTTTTtCGATATGAATATGCATTATAACACAGATAATAGTTGTATTATAGTATAAGTTCTTACAATCATACTCCTCTAACCCATTTATTAATTcaAGGGGGCCGATAACTATAATTGTAATGTCTACATTATAACAGAGCTAATTCACTGTATTATCACACACACTACAAATAGTTGTATTATAATATAAGATGTTACTATCTCATGTTATAACACTTTATCGATGGATCAATAATACTTACAAGGTCTAACACTTACTTAAAACCTATGGAAATCATAGTTATCCCATAAATTTTGAACAAATGATAGTTGCTTTATAAAATGGCCATCCCTTGGGAGTGCATACCATCCACCTACACTCGATTTTAGGAAATACGTACTCTTTGGTTTGATTTTCCTTACAAACTTATTTGATTCTCATAATATGGCCAGTCATTTATGTATTGATGAGGAATATGGATACGTGTTATAACACAGATGAATAGTTGTGTGACATATCCAAAAGTCCTACACCCATTAACCGGGGTAAGCCTATAAACATTGAAGAATTGAGAATTGGTTTATAAAATGGGTCAGCACATGGAAGTGTATATTGTCCCAAAAAGAGTAGATAGAATTAACTGATTGTTCTCCCTAATATTGTATTGAAGGTGGTCTACAATTGCTACTTGTTTGGACGGGAGAACAGATAATGAGATAAAGAACTACTGGAACACACATCTTAAGAAAAAGCTCTTCCTTATGGGAATTGATCCTGTCACACATCGACCTCAAGCAAATCTTGATATCTTTTCAAACATCTTAACTCTCCTTGCATCCTCAAATCTTAACAATTTCCTACACACACCTCCACTGGACATTAATGTACTTCGACTACAGACAGACGCAACACAGTTGGCCAAAGTTCAAATCATGCAAAGCCTTGTTCAATTACTCGCAGCTTCGAATTCTTCTCCTACTATTGATGCTCTGAGTCTATTAGCATCATCGCCACCCTCCCTTGGAAATCATAACCAATCTGGTTCCCTAAATCAGCATTTGGACCCAGCAATATCTTTAATGGACATATTGAGTTTTGGAAATTCACCTTTTGTCAACAACTTTCCATCACAAAGTAATAATTTCACAGCCAATTCTACGCCTTTAAATCCTACTTTAGAACAAATGCAAGAGCAGGTTTACTCTAATAATGCGTCACCAAATTCATTGTCGTCCACTCATTTTGAGGCTTGGGATGGACTAAACCATGGTGCGGGTCTTCATTGGGATGATTATCTTATAAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020260795.1	4.4e-88	protein ODORANT1-like
Swissprot	Q9S9Z2.1	6.4e-60	Myb-related protein 93
trEMBL	A0A5P1F064	3.2e-88	Transcription factor MYB39

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G16770.1	62.23	2e-65	245	AtMYB9;MYB9	myb domain protein 9

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G05707	AT5G16770.2	188	64	3	2	188	3	184	62.23	2e-65	245
AfisC7G05707	AT5G16770.1	188	64	3	2	188	3	184	62.23	2e-65	245
AfisC7G05707	AT1G34670.1	281	124	6	2	275	3	265	46.98	5e-61	231

Ortholog group

Species	Genes
Allium cepa	g66244.t1
Allium fistulosum	AfisC7G05707
Allium sativum	Asa3G00619.1; Asa3G00620.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	13	60	62.6	2.5e-17
PF00249.28	Myb_DNA-binding	Domain	66	111	54.3	9.7e-15

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135	F	transcription factor activity, RNA polymerase II transcription factor recruiting
GO:0016049	P	cell growth
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009625	P	response to insect
GO:0009651	P	response to salt stress
GO:0009682	P	induced systemic resistance
GO:0009723	P	response to ethylene
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009800	P	cinnamic acid biosynthetic process
GO:0009909	P	regulation of flower development
GO:0010091	P	trichome branching
GO:0010200	P	response to chitin
GO:0010224	P	response to UV-B
GO:0010438	P	cellular response to sulfur starvation
GO:0010439	P	regulation of glucosinolate biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0042335	P	cuticle development
GO:0043565	F	sequence-specific DNA binding
GO:0080091	P	regulation of raffinose metabolic process
GO:1903086	P	negative regulation of sinapate ester biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09422	MYBP; transcription factor MYB, plant	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network