result

Gene information

Detail information of AfisC7G05843

Location

Gene	Chr	Start	End	Strand
AfisC7G05843	chr7	1051025190	1051027409	-

Sequences

CDS

>AfisC7G05843
ATGATAGCTATGAAGTTCGTAACAACTAGAATCCTTTCAGTCATCATCATTTTCTTCCTAAAATTTGCAGTTTCAAGCAATGAAAACTTCATCTTCAATGGATTCATCAACTCTGATTTAAGCCTTGATGGTGTTGCATCAATAACTTCTAATGGCGTTCTTGCTATAACAAATGGAACAAGTCGCACAACGGGCCACGCTTTTCTTCCATATACTCTTAATTTCAAGTCCAAGGGAGGTAAACCACTCTCTTTTTCGACTACTTTCGTGCTTGCAATTGCTGCGGAAGTGTCATCTGTTAGTGGTCAAGGCATGGCTTTTGTTATTTCTAAAAGCTCAAACTTTTCAACTGCTTCAGGCAGCCAGTATTTAGGGCTTTTTAATGAGAAAACCAATGGGCTCGCTGATAACCATGTTTTTTCAATTGAGTTTGACACATTTTTAAGCCCTATCTTCAATGATATTGACGATAACCATATTGGAATCGATGTTAATAGCTTAAACTCTATAGCTTCACATTCAGCAGGTTATTATGACGATGAAACTGGTTTGATTACAAATCTGACTTTAAAAAGTGGGAAACCAATGCAAGTGTGGGTAGATTTTGATGGTGAAAGTATGCAACTTAACGTTACTATATCACCTTTGCCAATGACCAAACCTAAAAAACCACTTATATCCAATATTGTTAACCTTACGGATGTCATCACAAATTCTAGCATGCATGTTGGTTTCTCTTCAGCTACCGGTGCCTTTCGCTCTTACCATTTTGTTTCTGGATGGAGTTTCAAGATGAATGGTGTGGCGGATGCACTCGACTACACAAAACTTCCTTCAATTCCTAGACTTGGTCCAAAAAGAAATAAACATGTTCTGGTTATAGTACTTCCTATAGTTTCTTGTTTGACAGTGGTGTCAATTATTGTTGCATTTGCATTATTAATGCAAAGGAGGCTGAAATATGCCGAGTTAGTCGAGGATTGGGAGCTAGAATACAGGCCTCATAGATTTTCGTACAAAGATTTATTCCAAGCGACAAAAGGCTTCAGTGAAAAAGATCTATTAGGCAGTGGAGGTTTTGGCAGAGTTTACAAAGGCGTTTTGCCAAAATCAGGAGTAGAAATTGCAGTGAAGAAAGTATCCTGCGAATCAACACACGGCATGAAGCAGTTTGTTGCTGAAATTGTTAGTATCGGTCAGCTCTCTCACCGTAACCTTGTTCAACTTTTAGGCTACTGTAGGAGAAAAGGAGAACTGCTTTTAGTCTATGACTTCATGCCTAATGGCAGCCTCGATAGATTCTTATATGATCAATCAAAAGCAAGTCTAAACTGGGCACAACGATTTCATATCATTAAAGGAGTGGCAGCCGGTCTTTTATACTTGCATGAGGATTGGGAGCAAGTTGTAATACACAGAGATATTAAAGCAGGCAACGTGTTGCTAGATAAAGAAATGAATGGGAAGCTTGGAGATTTCGGGCTAGCAAAATTATATGATCATGGTGCTGATTTGCAAACCACTCATGTTGTTGGAACTCTGGGCTATCTTGCACCTGAACTTGTAGCAAATGGAATGGCAACTGCTGCAACTGATACATATGCTTTCGGTGTATTTCTTCTTGAAGTGACTTGCGGAAGGAGGCCTAACTCTACCATACAAGGAGAAAATATAGTGCTGATGGATTGGGTGTTAAAAAATTATCAAGGAGGGCAGCTTTCTAAAACGGTCGATCCAAGATTGCAAGACAACGACTGTGAGTACGAAGTTGAGTTGGTTTTGAAGCTTGGGCTGTTATGTTTAAACCATATTCCTCAAGCTAGGCCTACCATGCGACAAGTGGTGCAGATTCTTGAGGGTGGTGCACCTCTTCCTGAGTTACCACTAGGCTATATGAACTTGAGTACACTGTTGCCATTTGCAAGTGAAGGGTTTGATGGTTTCCATATGACTTCGTTCTACTCAGGACCTAGTATTTCAGACATATCTTATAGTAGGTAA

Protein

Gene

>AfisC7G05843
GTTGGTTTCATACAGCAATCGTTTTAATTGAATCGTTCTCAGCTAGATGCATTGCACCTATTTGTCATTCATTCATTTAATAAATAATGCTGACTTTATTTATAAATATCATGTGCCTTTTACAGTTGTACTGTTATTATGTGTTCAAAATACTATCAATCGGATATATATCAACTTGTTCAATTTCTCTAAATTCTTTATAGCTTAATTTCCTCTCCCATGATAGCTATGAAGTTCGTAACAACTAGAATCCTTTCAGTCATCATCATTTTCTTCCTAAAATTTGCAGTTTCAAGCAATGAAAACTTCATCTTCAATGGATTCATCAACTCTGATTTAAGCCTTGATGGTGTTGCATCAATAACTTCTAATGGCGTTCTTGCTATAACAAATGGAACAAGTCGCACAACGGGCCACGCTTTTCTTCCATATACTCTTAATTTCAAGTCCAAGGGAGGTAAACCACTCTCTTTTTCGACTACTTTCGTGCTTGCAATTGCTGCGGAAGTGTCATCTGTTAGTGGTCAAGGCATGGCTTTTGTTATTTCTAAAAGCTCAAACTTTTCAACTGCTTCAGGCAGCCAGTATTTAGGGCTTTTTAATGAGAAAACCAATGGGCTCGCTGATAACCATGTTTTTTCAATTGAGTTTGACACATTTTTAAGCCCTATCTTCAATGATATTGACGATAACCATATTGGAATCGATGTTAATAGCTTAAACTCTATAGCTTCACATTCAGCAGGTTATTATGACGATGAAACTGGTTTGATTACAAATCTGACTTTAAAAAGTGGGAAACCAATGCAAGTGTGGGTAGATTTTGATGGTGAAAGTATGCAACTTAACGTTACTATATCACCTTTGCCAATGACCAAACCTAAAAAACCACTTATATCCAATATTGTTAACCTTACGGATGTCATCACAAATTCTAGCATGCATGTTGGTTTCTCTTCAGCTACCGGTGCCTTTCGCTCTTACCATTTTGTTTCTGGATGGAGTTTCAAGATGAATGGTGTGGCGGATGCACTCGACTACACAAAACTTCCTTCAATTCCTAGACTTGGTCCAAAAAGAAATAAACATGTTCTGGTTATAGTACTTCCTATAGTTTCTTGTTTGACAGTGGTGTCAATTATTGTTGCATTTGCATTATTAATGCAAAGGAGGCTGAAATATGCCGAGTTAGTCGAGGATTGGGAGCTAGAATACAGGCCTCATAGATTTTCGTACAAAGATTTATTCCAAGCGACAAAAGGCTTCAGTGAAAAAGATCTATTAGGCAGTGGAGGTTTTGGCAGAGTTTACAAAGGCGTTTTGCCAAAATCAGGAGTAGAAATTGCAGTGAAGAAAGTATCCTGCGAATCAACACACGGCATGAAGCAGTTTGTTGCTGAAATTGTTAGTATCGGTCAGCTCTCTCACCGTAACCTTGTTCAACTTTTAGGCTACTGTAGGAGAAAAGGAGAACTGCTTTTAGTCTATGACTTCATGCCTAATGGCAGCCTCGATAGATTCTTATATGATCAATCAAAAGCAAGTCTAAACTGGGCACAACGATTTCATATCATTAAAGGAGTGGCAGCCGGTCTTTTATACTTGCATGAGGATTGGGAGCAAGTTGTAATACACAGAGATATTAAAGCAGGCAACGTGTTGCTAGATAAAGAAATGAATGGGAAGCTTGGAGATTTCGGGCTAGCAAAATTATATGATCATGGTGCTGATTTGCAAACCACTCATGTTGTTGGAACTCTGGGCTATCTTGCACCTGAACTTGTAGCAAATGGAATGGCAACTGCTGCAACTGATACATATGCTTTCGGTGTATTTCTTCTTGAAGTGACTTGCGGAAGGAGGCCTAACTCTACCATACAAGGAGAAAATATAGTGCTGATGGATTGGGTGTTAAAAAATTATCAAGGAGGGCAGCTTTCTAAAACGGTCGATCCAAGATTGCAAGACAACGACTGTGAGTACGAAGTTGAGTTGGTTTTGAAGCTTGGGCTGTTATGTTTAAACCATATTCCTCAAGCTAGGCCTACCATGCGACAAGTGGTGCAGATTCTTGAGGGTGGTGCACCTCTTCCTGAGTTACCACTAGGCTATATGAACTTGAGTACACTGTTGCCATTTGCAAGTGAAGGGTTTGATGGTTTCCATATGACTTCGTTCTACTCAGGACCTAGTATTTCAGACATATCTTATAGTAGGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010943349.1	3.6e-223	L-type lectin-domain containing receptor kinase IV.1-like
Swissprot	Q7XUN6.2	3.0e-206	Protein SALT INTOLERANCE 2
trEMBL	A0A8B8ZUC4	3.1e-224	L-type lectin-domain containing receptor kinase SIT2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	52.30	0.0	667	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC7G05843	AT3G53810.1	652	293	9	25	661	22	670	52.30	667
AfisC7G05843	AT2G37710.1	649	293	6	25	661	22	668	52.70	662
AfisC7G05843	AT4G02410.1	627	281	10	25	638	24	647	52.63	637

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	28	278	255.0	6.7e-76
PF00069.22	Pkinase	Domain	350	616	166.4	7e-49

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0002229	P	defense response to oomycetes
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network