result

Gene information

Detail information of AfisC7G05851

Location

Gene	Chr	Start	End	Strand
AfisC7G05851	chr7	1052057405	1052059399	+

Sequences

CDS

>AfisC7G05851
ATGAAGTTCGTAACAGCAAGAATCTTCTCATTCATCATCGTTTTCTTCCTAAAATCTGCAGTAATTTCGACCAATGAAAACTTCATTTTCAATGGATTCACCAACTCTAATTTAAGCCTTGATGGCTCTGCATCAATAACATCTGATGGTGTTCTTGCCATAACAAACGGAACGAGTAACACAATGGGCCATGCTTTTCTTCCATATGCTCTTAATTTCAAGTCCTGCAGAGGCAAAACACGCTCATTTTCAACCACTTTTGTGCTTGCAATAGCTTCTGAAGCATCATATATTAGTGGTCATGGCATGGCTTTTGTTATTTCTAAAAGCACAAACTTTTCAACCGCTTTAACTGACCAGTACTTGGGACTGTTTAATGTGAAAACTAATGGCATCGCTGAAAATCATATTTTTGCTATTGAGTTTGATACACTTATGAACGCTGGCTTCCATGATATTGATGATAACCATGTTGGAATAGATGTTAACAGCTTGACCTCAATAGCTTCACATACTGCAGGTTATTATGATGATGATACTGGTTTGTTTACTGATCTGACTTTAAGAAGTGGGCAACCGATGCAAGTGTGGGTTGATTTTGATGGGAAAAGTATGCAGCTTGATGTTACTATGTCTCCTTCGGAAATGGCCAAACCTAAAATGCCACTTGCATCTAGCATTGTCAACCTTACGAATGTCATCACAAATTCGACCATGTACGTTGGTTTTTCTTCATCTACTGGTTCCTTTCGCTCCCATCATTTTGTTTCTGGATGGAGTTTTAAAATGAATGGTGTGGTGGATGCACTCGACTACACAAAACTTCCTTCAATTCCTAGAATTGGACCAAAAAGAAACAAACATGTTCTGCTTATATTACTTCCTATAGTTTCTTGTTTGGTGGTGTTGCTGATTTTTCTTGCATCTGCATTGCTAGTGCAAAGAAGATTGAAATATGCTGAGTTAGTCGAGGATTGGGAGCTTGAATTTAGGCCTCATAGACTTTCGTACAAAGATTTATTCCAAGCAACAAAAGGGTTTAACGAAAAAGATCTATTAGGCGCCGGAGGTTTTGGCAGAGTTTACAAAGGTGTTTTGCCAAAATCAGGCATACAAGTTGCGGTGAAGAAAGTATCGTACGAATCAACAAACGGCATGAAGCAGTTTGTTGCTGAAATCGTCAGCATCGGTCAGCTATCTCACCGTAACCTCATTCAACTTTTTGGCTACTGTAGGAGAAAAGGAGAACTGCTTTTAGTCTACGATTTCATGCCCAATGGCAGCCTCGATAGATTCTTATACGATCAATCAAAACCAAGTCTAAACTGGGCACGACGATTTCATATTATTAAAGGAGTGGCAGCTGGTCTTTTATACTTGCATGAAGGCTGGGAGCAAGTTGTAATACACAGAGATATTAAAGCAGGCAATGTTTTGTTAGATAAAGAAATGAATGGGAAGCTTGGAGATTTCGGGTTAGCAAAATTATATGACCATGGTGCTGATTTGCAAACCACTCATGTAGTTGGAACTCTGGGCTATCTTGCACCTGAACTTGTAGCAAATGGAATGGCAACTGCTGCAACTGATACATATGCTTTTGGTGTGTTTCTTCTTGAAGTGGCTTGCGGAAGGAGACCTAACTCCACCATAGAAGGAGAAAATATAGTGCTGATGGATTGGGTATTAGAAAATTACCAAAAAGGGCAGCTTTCTAAAACGTTCGACCCAAGATTGCAAGACAAGGACTGTGAGTACGAAGTTGAGTTTGTTTTGAAGATTGGGCTGTTATGTTTGAACTATATTCCTCAAGCTAGGCCTACTATGCGACAAGTGCTGAAGATTCTTGAAGGTGGTGCACCTCTTCCTGAATTACCACCAGGCTATATGAACGTAAATACACTGTTGCCATTTGCAAACGAAGGGTTCGATGGTTTCCATATGAGTTCGTTCTACTCAGGACCTAGTACTTCAGACATATCTATTAGTAATTAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010943349.1	4.1e-227	L-type lectin-domain containing receptor kinase IV.1-like
Swissprot	Q7XUN6.2	6.6e-206	Protein SALT INTOLERANCE 2
trEMBL	A0A8B8J9J8	4.9e-230	L-type lectin-domain containing receptor kinase SIT2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	51.65	0.0	659	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC7G05851	AT3G53810.1	637	297	8	23	651	22	655	51.65	659
AfisC7G05851	AT2G37710.1	653	305	6	23	663	22	672	51.15	649
AfisC7G05851	AT4G02410.1	617	268	9	23	627	24	637	54.13	638

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	26	276	260.5	1.4e-77
PF00069.22	Pkinase	Domain	348	614	165.9	1e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0002229	P	defense response to oomycetes
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network