result

Gene information

Detail information of AfisC7G05860

Location

Gene	Chr	Start	End	Strand
AfisC7G05860	chr7	1053485826	1053487161	+

Sequences

CDS

>AfisC7G05860
ATGTCTCCTTTGGAAATGGCCAAACCTAAAAAGCCACTTGCATCTAGCGTTGTTAACCTTACGAATGTCATCACAAATTCTACCATGCATGTTGGTTTTTCTTCAACTACTGGTTCCTTTCGCTTCCATCATTTTGTTTCTGGATGGAGTTCTAAAATGAATGATGTGGCGGATGCACTCGACTACACAAAACTTCCTTCAATTCCTAGAATTGGACCAAAAAGAAACAAACATGTTCTGCTTATATTACTTCCTATAGTTTCTTGTTTAGTGGTGTTGTTGATTTTTCTTGCATCTGCATTGCTAGTGCAAAGAAGATTGAAATATGCTGAGTTAGTCGAGGATTGGGAGCTTGAATTTAGGCCTCATAGATTTTCGTACAAAGATTTATTCCAAGCAACAAAAGGGTTTAACGAAAAAGATCTATTAGGCATCGGAGGTTTTGGCAGAGTTTACAAAGGTGTTTTGCCAAAATCAGGCATAGAAGTTGCGGTGAAGAAAGTATCGTACGAATCAACGAACGGCATGAAGCAGTTTGTTGCTGAAATCGTCAGCATCGGTCAGCTATCTCACCGTAACCTCATTCAACTTTTTGGCTACTGTAGGAGAAAAGGAGAACTGCTTTTAGTCTACGATTTCATGCCCAATGGCAGCCTCGATAGATTCTTATACGATCAATCAAAACCAAGTCTAAACTGGGCACGACGATTTCATATTATTAAAGGAGTGGCAGCTGGTCTTTTATACTTGCATGAAGGCTGGGAGCAAGTTGTAATACACAGAGATATTAAAGCAGGCAATGTTTTGTTAGATAAAGAAATGAATGGGAAGCTTGGAGATTTCGGGTTAGCAAAATTATATGACCATGGTGCTGATTTGCAAACCACTCATGTAGTTGGAACTCTAGGCTATCTTGCACCTGAACTTGTAGCAAATGGAATGGCAACTGCTGCAACTGATACATATGCTTTCGGTGTATTTCTTCTTGAAGTGGCTTGCGGAAGGAGGCCTAACCCTACTGTACAAGGAGAAAATATAGTGCTAATGGATTGGGTGTTAGAAAATTATCAAAGAGGGCAGCTTCCCAAAACGTTCGACCCAAGATTGCAAGACAAGGACTGTGAGTACGAAGTTGAGTCGGTTCTGAAGCTTGGGCTGTTATGTTTAAACCATATTCCTCAAGCTAGGCCTACTATGCGACAAGTGGTGCAGTTTCTCGAGGGTGGTGCAACTCTTCCTGAATTACCACTAAACTATATGAACTTGGATACACTGTCACCATTTGAAAATGAAGGGTTTGATTGTTTTCATATGAGTTCGTTCTACTCAGGACTTA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010943349.1	5.9e-161	L-type lectin-domain containing receptor kinase IV.1-like
Swissprot	Q7XUN6.2	2.6e-145	Protein SALT INTOLERANCE 2
trEMBL	A0A6I9SHV6	4.2e-161	L-type lectin-domain containing receptor kinase IV.1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	54.04	6e-137	484	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G05860	AT3G53810.1	446	198	5	1	441	212	655	54.04	6e-137	484
AfisC7G05860	AT2G37710.1	421	179	3	1	418	212	631	56.53	9e-133	470
AfisC7G05860	AT4G02410.1	429	176	6	1	419	214	640	56.18	2e-129	459

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC7G05860
Allium sativum	Asa0G02246.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	1	66	39.7	3.5e-10
PF00069.22	Pkinase	Domain	138	404	168.5	1.7e-49

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0002229	P	defense response to oomycetes
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network