result

Gene information

Detail information of AfisC7G05867

Location

Gene	Chr	Start	End	Strand
AfisC7G05867	chr7	1054689928	1054692813	+

Sequences

CDS

Protein

Gene

>AfisC7G05867
ATGATGAATTCTGGAGACAACGGAGATTCCAGTGGAAGAAACAGCAATAATAAAAGAATCCTTAGTGACCATAAGAGTATAGGAGAACCAGAAACTAAAAGTAGGCCAGGAAATGATAATTTAGATGGCTACCAAGATAATTCAGCAGGCAGAAGGGAAAAACATAATAGACATACGCCTCATCAAATTCATGAACTTGAAAAGTAAGCACCATCCGCCAATGATTCTATTGAATGGATCGAGTCATTTTATCAAATATATGTGATTTTTGTTGTTATAGGATGTTCAAGGAGTGCCCCCATCCTGATGAGAAACAAAGGCTACAGTTGAGTCGTCGCCTTAAACTTGACGCTCACCAAGTTAAGTTCTGGTTTCAGAACCATCGTTTTCATACGAAGGTACACTTTTCATGTTTGCATCTACTAAATCGATCTATATTAATGCATGTATTCATTTTTGTTGGATATTTATACAGAGGCGAATAGAACGACATGAACACTCTATGCTGGAAGAGGAGAAGGAAAAGTTAAGAAAAGAAAACTTACTGGTAAAAGAAGCACTGAGCAACCCCACATGCAACAACTGTGGTGGGCCGGCCAAGTTAGGAGAAGTAAATTCTGAACAACAACAACTGGTAACTAAAAATGCTTGTCTAAAGGCTGATCTGGAACGGATGCGTGTCCTAGTTGGGAAGTTCCTGGGCCACCCATTATCAAACATGAACTCCTCGTTCAACTTGGGCCTGGGAGGTGGACTTAGCCATGGCTTTGCTAACCAAACGGCACGGCCCAGTACAGATGTGTCCAGCTTAGGGAATAACCAGCTGGTGGTGGCTTCTAGCAATAACAATGGAAATGTTGGTGTAGATGGGAGTGGTCAGAGATCGAAGATGTTTGAACTTGCCTCGGCAGCTATGGATGAGTTGATGAAAATGGGGCAAATAGAAGAGCCTTTGTGGGTGAATAATGGTGTGAATGGGAGGTATATGCTGAATTTTGAGGAGTATGAGAGGATGTTTCAAAGGAACGTAGGAGCGAAACCGGATGGATGTGTAAAGGAGGCGAGTAGGGCATCTGGAGTTGTGGTTGTTAATAGTAAAGCCCTTGTTGCAATACTCATGGATGATGTATGTGGCATCTTAAGTTTACTTACCACCAATATCTGGGTTTTTTTTTTAATTATTAATTTTTTGATAGAATATATATAAAAGATAAAATCTGTATAGATTATGCAATCTTAGAACTAAAATCCACTTAAAAGTCAACATATAAACTTACTACGAAACATTACACTTACTTCAGTGTATATACATACTGAAAGTTTAAATATGATTACTCATGAATAAATGATGATACAGAAACGCTGGGCGGATATGTTCCCATGTTTGATTGCCAGTACCACCACCACTGATGTCAAATATGGTGGCATGGGTGGAACAAGAGATGGCGCTCTTCAACTCGTAAGCATAATAAACTTAGATTCATTCTGAAATTTATTTTAAGCTAATTCATGAGATGCTCAACTGTTATTTCTGACATACCTGCATCACGTATATCAGATGGAAGCAAGACTTCAAGTTCCGTCACCATTTGTTCCAACCCGGGAAATCAAATTTCTTCGCTTTTGCAAGCGTCATCCAAATGGATTATGGGGAGTTGTTGATGTTTCTATTAGTGGCATTCGTGAATTTGCTACTGCAACAACTGGGAATATAAGCTGCTACAGATTGCCTTCAGGCTGCATTGTGCAGGATATGTCTAATGGCTCCTCTCAAGTAATTTACATAATTTCATTCTCATCTTGTTATCACACTTTACTGAATGTTATGATTCTAAAGTTAAGTAATAGAACATGTACTACTTTTAAATTTAATGGGTGTGTTAAATTAAAATGCATGCCCTGATGATCTTGCTGATTCAAGAGTTTAACAAAAATTTGACAAGAATAGTTTGGTTATATTCCTTGGAATTGGTATTGTTATTATATTAATGATCATGAGTTAACTGCTTATTTCATCACATTCTATACCCTAGCATTCTGTCTTCTTTTGGCACAGTAGTGTAATTGTGATTTGGGTTGGATAAACATGTGACAACAAGTATATTTTTCTGCAATATGTGAAATAACTGAAGTGGGGATATTTGAATTTGTTGTCCAAACTCCAAAGTTAAGTTTTGTTCTTCTAGAAAATGAGATATGATAAACAAACCATGTCAGCTTGCACATTCGTTGGACAAAACATAACTGTAAACTGAATATAATGCAGGTAACATGGGTGGAACATACAGAATACGACGAAAGCAGGGTGCACGCTCCTTATTGTTCTCTTTTCAAATCAGGCTTATGCTTCAGCGCACAATGCTGGCTCGCGAATCTCCAACGTCAATGCGAATACCTGGCCTTTCTCGCTCCTTCCATCCCTGATAATTATAATCAGACTGGTCAGTCATCTCTCTATAGTTTAATATTTTATACAATCTAAGTACATCATATGTATGTTGTATATGCTAAATAGGCTTTGCAGGGATGACGACAAATGAAAGAAGGAGCATTCTAAAACTAGGCCAAAGAATGACAAAGAACTTCTGTGCCAGCATCTGTGCATCATCATCACTGCATCAATGGAGCGAAGTAATCTCAGATGGAAACATCTGGATCATATCTCGTCAGAGCATGAACGATCCTGGTGAGCCAAAGGGCGTTGTGCTGAACGTAGCAACCTCAGTTTCCTTACCACTGTCCTCTACGAGGATCTTCGACTTTCTAAGAGATGCGAGTACGAGAAGCGTGTGGGACATTCTGGCCAATGGCAGGCCCATGCAAGAGATGACTCCCATCATCAAAGGGCAGAATCCTGGCAACGTCGTCTCCCTCCTCCGATCTGAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010919252.1	1.5e-159	homeobox-leucine zipper protein ROC5 isoform X2
Swissprot	Q9M2E8.1	1.2e-142	Protein HOMEODOMAIN GLABROUS 1
trEMBL	A0A8X8ADA0	1.2e-161	Uncharacterized protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G61150.1	49.50	3e-160	562	HD-GL2-1;HDG1	homeodomain GLABROUS 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G05867	AT3G61150.1	604	277	10	23	608	83	676	49.50	3e-160	562
AfisC7G05867	AT4G00730.1	591	262	11	29	609	106	679	51.10	4e-160	561
AfisC7G05867	AT4G04890.1	567	285	11	51	607	62	608	44.44	2e-133	473

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	53	108	61.9	3.4e-17
PF01852.16	START	Domain	249	472	126.3	9.5e-37

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0009828	P	plant-type cell wall loosening
GO:0009845	P	seed germination
GO:0009913	P	epidermal cell differentiation
GO:0010091	P	trichome branching
GO:0042335	P	cuticle development
GO:0043481	P	anthocyanin accumulation in tissues in response to UV light
GO:0048497	P	maintenance of floral organ identity
GO:0048765	P	root hair cell differentiation
GO:0048825	P	cotyledon development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network