result

Gene information

Detail information of AfisC7G06036

Location

Gene	Chr	Start	End	Strand
AfisC7G06036	chr7	1086456526	1086458906	+

Sequences

CDS

>AfisC7G06036
ATGGAAGAAGTAGAAGAAGCAAACAGAGTAGCTCTGCAGAGTTGTCATAGACTTTTAAGTCACTTAACCAAATCTCAAGATCAAGCACAGAACAGAAACTTAACTGTAGAAACCAATGAAGCTGTTTCCAAACTCAAAAGAGTAGTAACTTTGCTCAATAATGGAGTTGGTCATGCAAGATTTAGAAAATCAAAGAAAAACCATTCATTCAATCACAAAATCTTTCTAGATAATCCATTATCCTCATCCAATCCTACTCCAGCCATAATTGGCACTCCAATTCCAAGAAACTTTCTTACAATTTCAACCCCTGAACTGGATTCTTCAACTTCTAAAACCCAAATTCCTTTATTAGAGCAATTAGCTTCTTCATCTTCGCATAATTTTCAATACTACCATCATCAACAGCAACAGCAGCAGCAGCAACAGAACACCCACCAAAGAATTCATCAGATTCAGCATCAGATGAAGCTTCAATCAGAGATGTTTAAGAGGAGTAGCAGTAGTAGCGGAATGAACCTTAAATTCGATAACTCTAGTTGCACTCCTACCATGTCATCTACTAGGTCGTTTCTTTCAAGTTTGAGCATGGATGGAAGCGTGGCAAGCTTAGAAGGGAAGCCATTTCAATTGATAGGCGGGTCTCAGTTGTCAGAACCCGTTAACCTTAACACGGCCAATAAGAGGAGGTGCACCGGTCGTGGTGAGGATGGTAGTGGCAAATGTGCGACTAGTGGAAGATGTCATTGCTCGAAGAGGAGGAAGATGAGGGTTAAAACGACAATTAAAGTTCCTGCCATTAGCAACAAGCTTGCGGATATCCCTCCTGATGAGTATTCTTGGAGGAAGTATGGGCAAAAACCCATTAAGGGATCTCCTCATCCAAGGGGATACTATAAATGTAGTAGCATGAGAGGATGCCCGGCTAGGAAGCATGTAGAGAGATGCTTAGAAGATCCATCTATGCTCATTGTGACATATGAAGGAGATCACAACCACACAAGGCTACTCACTCAATCTGCTACTACTTAA

Protein

Gene

>AfisC7G06036
TTCTCCATAGACCGTGCTATATAATCATATATTATAATGTGTATAAATAACTTACAAGTAAATTATATTATATTATTATATATTGTTGTTATGCAAATTTTTCTTCCCTTCACACTTTCTATTTTCATGGCAGCAATCTAGGGTTTCCCCACATCAAATCCAAGGTATTTCCCCTATTTCTTCTTGTTTTTTCAAACTTTGATTATTGTCTTTCTTTTTTGGTAAAAATCATGATGTGCCTTTTTGTTGTATGATGGTAAGATTTCATGCAAGAATTGAAAGATCTTCCCTTGTTAAGCATTTATTGTTCCCTTTTGGGTTTTGTTATATTATAAGTTCATTTATTTGCTGCTATTCATGTCTATTATTTCCATTCTTAGCTTAATCTTTTGAAATATCTCACATGGGTTTGTTTTGATTTCCATTTTTCTTGTAGCCCTTTCGATGGGTTTGTCCAAAATTGAATGATGAAGTGGATCAAGCTGCAAAAAGTTTGAGCTTTTTTTTCCCCCTTCTGTAGATATTTTTCACTCTTTGGTAGAATTACTACTTAATTTAGTTAAGAATGGAAGAAGTAGAAGAAGCAAACAGAGTAGCTCTGCAGAGTTGTCATAGACTTTTAAGTCACTTAACCAAATCTCAAGATCAAGCACAGAACAGAAACTTAACTGTAGAAACCAATGAAGCTGTTTCCAAACTCAAAAGAGTAGTAACTTTGCTCAATAATGGAGTTGGTCATGCAAGATTTAGAAAATCAAAGAAAAACCATTCATTCAATCACAAAATCTTTCTAGATAATCCATTATCCTCATCCAATCCTACTCCAGCCATAATTGGCACTCCAATTCCAAGAAACTTTCTTACAATTTCAACCCCTGAACTGGATTCTTCAACTTCTAAAACCCAAATTCCTTTATTAGAGCAATTAGCTTCTTCATCTTCGCATAATTTTCAATACTACCATCATCAACAGCAACAGCAGCAGCAGCAACAGAACACCCACCAAAGAATTCATCAGATTCAGCATCAGATGAAGCTTCAATCAGAGATGTTTAAGAGGAGTAGCAGTAGTAGCGGAATGAACCTTAAATTCGATAACTCTAGTTGCACTCCTACCATGTCATCTACTAGGTCGTTTCTTTCAAGTTTGAGCATGGATGGAAGCGTGGCAAGCTTAGAAGGGAAGCCATTTCAATTGATAGGCGGGTCTCAGTTGTCAGAACCCGTTAACCTTAACACGGCCAATAAGAGGAGGTGCACCGGTCGTGGTGAGGATGGTAGTGGCAAATGTGCGACTAGTGGAAGATGTCATTGCTCGAAGAGGAGGTTTATATTTCGAATTCTTTTCTCTTAAAGATAAATGTTTTAATTAATGTATAACAGATACAATGACATATGAGATTTTGATAACTTTAATGTTTCTGTTATTGTTGTTTTGTAGGAAGATGAGGGTTAAAACGACAATTAAAGTTCCTGCCATTAGCAACAAGCTTGCGGATATCCCTCCTGATGAGTATTCTTGGAGGAAGTATGGGCAAAAACCCATTAAGGGATCTCCTCATCCAAGGTATTTTAAGCACATACATTTCTCGCAATATTTTATACTTTCATATGTTAGTATTTCATCAAGAATTGGTAGTTTGTTTAATTACACATGATCTTTGATACATGATCAATTGTTTTACTACTATATCACATAGAAACGATTAGGACGTCAGTTTTGTTTGAATACAATCAAACTTTTGATCACTACCATTTTTTGTATGCGGCATTAGTTTCATTTATAAAAAACATTAGGAAATTTGATACTATATCACATAGAAACGATTCATAATGCACAAAATTTGTGTAGGGGATACTATAAATGTAGTAGCATGAGAGGATGCCCGGCTAGGAAGCATGTAGAGAGATGCTTAGAAGATCCATCTATGCTCATTGTGACATATGAAGGAGATCACAACCACACAAGGCTACTCACTCAATCTGCTACTACTTAAGCGAGGCAAATACATATGAGACAAGGACATGGATAAATTTTCTCAGTAAGAAATGCTTATTTTTATCTAACAAGGGGTGGTGGTATATTGATAGTAGTAGTAGCAGTAGAGGTTGAAGGAATAGAAGTCACATAATGGACAGTATGCTTCATTTTTTTTTATCAAGTTTGTCATGAATTTCATGTTTTTGTAACTTGTTGTATGTATCATTTCCGCCATGATCTGAGCGTCAAATGGCTATGTGGGGGGATGAACTTTGTCATATTTTACAATGTTGTTTAAATTTGCATTTTAGTACTTTCTTGTATTGGTTTATTTCAGTCCTTGACTTCAGTGTATTTCTTTGAAACATCCTCATTGTTTACCTTTGTGTCTCTATGTGCA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256179.1	2.0e-124	protein WRKY1-like
Swissprot	Q32SG4.1	1.6e-78	WRKY DNA-binding protein 1
trEMBL	A0A5P1F9I7	1.4e-124	WRKY domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G30590.1	49.48	3e-82	302	WRKY21	WRKY DNA-binding protein 21

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G06036	AT2G30590.1	384	149	11	1	343	1	380	49.48	3e-82	302
AfisC7G06036	AT3G04670.1	353	152	11	1	343	1	330	47.59	4e-77	285
AfisC7G06036	AT5G28650.1	359	144	14	1	343	1	330	47.35	2e-74	275

Ortholog group

Species	Genes
Allium cepa	g23471.t1
Allium fistulosum	AfisC7G06036
Allium sativum	Asa3G00347.1
Arabidopsis thaliana	AT3G04670.1; AT3G04670.2; AT5G28650.1
Oryza sativa	LOC_Os03g53050.1; LOC_Os12g40570.1; LOC_Os12g40570.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF10533.6	Plant_zn_clust	Domain	228	273	67.4	6.7e-19
PF03106.12	WRKY	Domain	277	333	94.2	4.1e-27

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005516	F	calmodulin binding
GO:0005634	C	nucleus
GO:0007263	P	nitric oxide mediated signal transduction
GO:0009555	P	pollen development
GO:0009739	P	response to gibberellin
GO:0009793	P	embryo development ending in seed dormancy
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0010150	P	leaf senescence
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network