Detail information of AfisC7G06217


Location
GeneChrStartEndStrand
AfisC7G06217chr711168141311116825563+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK81569.18.5e-55uncharacterized protein A4U43_C01F30650
SwissprotC0HIA3.11.3e-44Protein SINGLE MYB HISTONE6
trEMBLA0A5P1FWD76.1e-55MYB transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G49950.144.587e-44 174ATTRB1;TRB1telomere repeat binding factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag539752.t1
Allium fistulosumAfisC7G06217
Allium sativumAsa3G00171.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain55534.21.9e-08
PF00538.16Linker_histoneDomain13018732.57.4e-08

Gene Ontology
AccessionOntologyName
GO:0000785Cchromatin
GO:0003691Fdouble-stranded telomeric DNA binding
GO:0005730Cnucleolus
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0009651Presponse to salt stress
GO:0009723Presponse to ethylene
GO:0009733Presponse to auxin
GO:0009737Presponse to abscisic acid
GO:0009739Presponse to gibberellin
GO:0009751Presponse to salicylic acid
GO:0009753Presponse to jasmonic acid
GO:0046686Presponse to cadmium ion
GO:0033613Factivating transcription factor binding
GO:0042803Fprotein homodimerization activity
GO:0043047Fsingle-stranded telomeric DNA binding
GO:0070491Frepressing transcription factor binding
GO:1990841Fpromoter-specific chromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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