Detail information of AfisC7G06235


Location
GeneChrStartEndStrand
AfisC7G06235chr711200492941120052884+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020269411.11.0e-92transcription factor UNE12-like
SwissprotO22768.23.6e-71bHLH transcription factor bHLH059
trEMBLA0A5P1EMZ77.2e-93BHLH domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G02590.156.214e-73 271UNE12basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag369204.t1; g95721.t1
Allium fistulosumAfisC7G06235
Allium sativumAsa3G00158.1; Asa5G00330.1
Arabidopsis thalianaAT1G03040.1; AT1G03040.2; AT4G02590.1; AT4G02590.2; AT4G02590.3
Oryza sativaLOC_Os03g58330.1; LOC_Os07g08440.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00010.23HLHDomain14018430.13.1e-07

Gene Ontology
AccessionOntologyName
GO:0001046Fcore promoter sequence-specific DNA binding
GO:0001228Ftranscriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0006366Ptranscription from RNA polymerase II promoter
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity
GO:0009555Ppollen development
GO:0009637Presponse to blue light
GO:0009733Presponse to auxin
GO:0009739Presponse to gibberellin
GO:0009911Ppositive regulation of flower development
GO:0040008Pregulation of growth
GO:0048446Ppetal morphogenesis
GO:0048766Proot hair initiation
GO:0048767Proot hair elongation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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