Detail information of AfisC7G06244


Location
GeneChrStartEndStrand
AfisC7G06244chr711220001641122036087-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020274535.18.7e-292DDT domain-containing protein PTM-like
SwissprotF4JYC8.14.4e-99PHD type transcription factor with transmembrane domains
trEMBLA0A8B8J3T81.7e-265DDT domain-containing protein PTM

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G12400.132.732e-106 385DNA binding;zinc ion binding;DNA binding

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Ortholog group
SpeciesGenes
Allium cepag195629.t1
Allium fistulosumAfisC7G06244
Allium sativumAsa3G00140.1
Arabidopsis thalianaAT5G12400.1
Oryza sativaLOC_Os07g46690.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02791.14DDTFamily11416431.02.1e-07
PF15612.3WHIM1Family22025823.62.5e-05
PF00628.26PHDDomain30935232.74.6e-08

Gene Ontology
AccessionOntologyName
GO:0000977FRNA polymerase II regulatory region sequence-specific DNA binding
GO:0003682Fchromatin binding
GO:0042393Fhistone binding
GO:0006955Pimmune response
GO:0008270Fzinc ion binding
GO:0044424Cintracellular part
GO:0045944Ppositive regulation of transcription from RNA polymerase II promoter

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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