result

Gene information

Detail information of AfisC7G06274

Location

Gene	Chr	Start	End	Strand
AfisC7G06274	chr7	1127040780	1127043069	-

Sequences

CDS

>AfisC7G06274
ATGTACCGCACTTTCTTGAACTCCTCCTCACCCAAACACCTGATCACAAAATCATACTTTTCAACTTCAGTAGATCCATCAGCTTCTCTAACTCTTCATTTTCTGATGAACTCATGCAACCTTTCTGAAGAAGCAGCTCTCCGCATCTCCAAACAAGTACACATAAGAAGAACAAAGACCCCTCATGCAGTGCTTTCCCTTCTCAAGTCATACAACTTTCCAAACCCCGGCATTGTAAAAGTCATAACCCGTCTCCCAGTAATCCTTTTAAGCAACCCCGACGGTATCATAAAGCCCAAACTCGAATTTTTTACAAACATCGGGTTCATGGGTTCTGCATTGACCCGCCTAATCACTTCTGATCCAACATTGCTCCGCTACAGCTTACAGAACAAGCTCCTTCCGAACTACAACATTCTAAAAGGCATTCTACAAACAAATGAAAATGTGATGTCTGCCATAAGGAGCTCCACACCGTTGCTCATGGCCGATCTCGATAAGACATTGCTACCAAGGATTAAGATTCTCAAAGAGAATCGTGTTTCAGTCGATGTTATATTTAAGCTGTTGACTATGTATAACAAGCATTTGATGGTGATGCATGATAATTTTGATGAGATATTAAGCTTTCTTAAAAAGACTGGGATCAGTGTGCAAAGTTCGATGTATGCGCATGCTTTTGGTGTGCTTGCTAGAATGAAGGATAACGAATGGGATACGAAGGTTGAACATTTCAAGAAGTTAGGATGGAGCGAAGAAGAAGTTATGGTTGCATTCACCAGACATCCTTATTGTATGAGTACGTCAACTGATAAGATTACGAAGAATTTTGAGTTTTACAAGCAGAAATTTGGTTGGGATTCAAGCTATGTTTCTAGGAATCCTGATTTGCTATCGTTTAGTTTTGAGAGAAGAGTTTTGATGCGATATAGGCTTTTGAATGTGTTGGAAAGGAGAGGTTTGTTTAGTGGAAAAGTTGGAGCAGGAAAGTTTAAGTTAGGGGAAAGGGAGTTCTTGGTGAAGTATGTTATGAAACATTATGGAGAAGTTGAGGAGCTAATTGATGATGATGTTAAGCTTAAATTGGTAGATTTTGGGCTGTTGATTGATACCAACTAA

Protein

Gene

>AfisC7G06274
ATTTTCCATTGCGTAACAAAGTCCTAATGTTAAATTTCTATTTTTAACAGTAATTAAATTACAAGTATATTAATTATTATGGTCTTAAAAATACCGTCTGCAGACTGTTTCCCGTGTGCAGACTGTTTCTTAAATTACAAGTGTATTCGATGCCTTCTTCTTCAAAGGCACACGTCGTTTGAAAGAATATAATCTCTCTGCATTTAGTCAGCCAATATTCAGATGGTATCAACCTTATTTCCGACGAATTTTCACCCAATTCAAAACCTAGCATGCATTGCTCAATACGTTCTTTAAACCGGATTTCTCCTTAACCATAAAACTTAGTATTTCTGATTTGTGAAATTAGTTGCAGACAAGGCGTTCGATAAAATTCGCATTCCAACCCTCATAAAAATGTACCGCACTTTCTTGAACTCCTCCTCACCCAAACACCTGATCACAAAATCATACTTTTCAACTTCAGTAGATCCATCAGCTTCTCTAACTCTTCATTTTCTGATGAACTCATGCAACCTTTCTGAAGAAGCAGCTCTCCGCATCTCCAAACAAGTACACATAAGAAGAACAAAGACCCCTCATGCAGTGCTTTCCCTTCTCAAGTCATACAACTTTCCAAACCCCGGCATTGTAAAAGTCATAACCCGTCTCCCAGTAATCCTTTTAAGCAACCCCGACGGTATCATAAAGCCCAAACTCGAATTTTTTACAAACATCGGGTTCATGGGTTCTGCATTGACCCGCCTAATCACTTCTGATCCAACATTGCTCCGCTACAGCTTACAGAACAAGCTCCTTCCGAACTACAACATTCTAAAAGGCATTCTACAAACAAATGAAAATGTGATGTCTGCCATAAGGAGCTCCACACCGTTGCTCATGGCCGATCTCGATAAGACATTGCTACCAAGGATTAAGATTCTCAAAGAGAATCGTGTTTCAGTCGATGTTATATTTAAGCTGTTGACTATGTATAACAAGCATTTGATGGTGATGCATGATAATTTTGATGAGATATTAAGCTTTCTTAAAAAGACTGGGATCAGTGTGCAAAGTTCGATGTATGCGCATGCTTTTGGTGTGCTTGCTAGAATGAAGGATAACGAATGGGATACGAAGGTTGAACATTTCAAGAAGTTAGGATGGAGCGAAGAAGAAGTTATGGTTGCATTCACCAGACATCCTTATTGTATGAGTACGTCAACTGATAAGATTACGAAGAATTTTGAGTTTTACAAGCAGAAATTTGGTTGGGATTCAAGCTATGTTTCTAGGAATCCTGATTTGCTATCGTTTAGTTTTGAGAGAAGAGTTTTGATGCGATATAGGCTTTTGAATGTGTTGGAAAGGAGAGGTTTGTTTAGTGGAAAAGTTGGAGCAGGAAAGTTTAAGTTAGGGGAAAGGGAGTTCTTGGTGAAGTATGTTATGAAACATTATGGAGAAGTTGAGGAGCTAATTGATGATGATGTTAAGCTTAAATTGGTAGATTTTGGGCTGTTGATTGATACCAACTAAGATACTTAGAATGGTGAGTAATTTTCTCATTTTCAAATTGAATCTTTACGTCCCTATCTTCATTTGAAGGTAATCAGTTACTTAGAAGAGTAATTTTCTACCCATCTTATACACACATATACTGATGTTGTGATATAATGATGGTTTTGAAAGATTTCTTTCTAGGAATCACTTTTGTCCTAGAGAACGGTCATTTAATTTTTATTTCGGAGAGCAACTTTTCCACTTGCATATAATAGCCAAATACCTTTTCAAATTCAAATTCAAATTAATTAAAAAATAAAATAAAGTGCATGCATGGGTGCTAAATATGTATCTATTTCTTTTATTCTCGGTCTTACACTTTATACTATGGTACTTTAGTACATAGTAGAGTAAAATTAGTGCAATTGCATAGTTCTGTCCGTGCATATATAGTCCAAAACTTTGAAAAACTCATCTGAGGGTAGTGCTTTCTTTTTTATAGTGGCAGCTGTACAGTATTTTTGCTTATGCTAAATTTGTTTTACTTGCTTCACACAGGTCAACGATCAGGAGGAACGTACTAGTAGAATCGTTGAAGACTGCAATTATTTCTAGTAAGGTAGATATACACATTTCTGCATTTTTCCAATTTAATATATTTTAAATCCATCCATGCAAGAATTAATTTTGCATTGTTTTTCTTGTCCATAATTACTGGTTGTAATTCATATGTTCAGAGTTTTATAATGGCAAGAATAAGACATAGGACACTAACTTTAAAAGCAGTATCTAACATTAATTTGAAAGTTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250225.1	1.5e-48	uncharacterized protein LOC109827619
trEMBL	A0A1R3L6K0	1.1e-48	Mitochodrial transcription termination factor-related protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G07900.1	32.83	3e-50	196		Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC7G06274	AT5G07900.1	329	219	2	29	355	69	397	32.83	3e-50	196
AfisC7G06274	AT1G21150.1	330	227	2	29	355	56	384	30.00	2e-39	160
AfisC7G06274	AT5G64950.1	323	217	3	54	368	64	386	30.34	3e-32	136

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	59	318	93.3	1.2e-26

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15032	MTERFD; mTERF domain-containing protein, mitochondrial	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network