result

Gene information

Detail information of AfisC8G00226


Location
GeneChrStartEndStrand
AfisC8G00226chr84522171845263644+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020271172.16.2e-256serine/threonine-protein kinase PAK 3
SwissprotQ86IX1.11.0e-93Serine/threonine-protein kinase dst1
trEMBLA0A5P1ENL74.5e-256Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT1G69220.153.700.0 802SIK1Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag354565.t1
Allium fistulosumAfisC8G00226
Allium sativumAsa1G04549.1
Arabidopsis thalianaAT1G69220.1; AT1G69220.2
Oryza sativaLOC_Os03g54780.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain184438236.43.1e-70

Gene Ontology
AccessionOntologyName
GO:0000139CGolgi membrane
GO:0000278Pmitotic cell cycle
GO:0000287Fmagnesium ion binding
GO:0000902Pcell morphogenesis
GO:0001569Ppatterning of blood vessels
GO:0001841Pneural tube formation
GO:0002011Pmorphogenesis of an epithelial sheet
GO:0003157Pendocardium development
GO:0005829Ccytosol
GO:0004702Freceptor signaling protein serine/threonine kinase activity
GO:0005524FATP binding
GO:0005654Cnucleoplasm
GO:0005730Cnucleolus
GO:0005798CGolgi-associated vesicle
GO:0005813Ccentrosome
GO:0006921Pcellular component disassembly involved in execution phase of apoptosis
GO:0007298Pborder follicle cell migration
GO:0007417Pcentral nervous system development
GO:0008134Ftranscription factor binding
GO:0010212Presponse to ionizing radiation
GO:0016324Capical plasma membrane
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0050821Pprotein stabilization
GO:0018107Ppeptidyl-threonine phosphorylation
GO:0030033Pmicrovillus assembly
GO:0030216Pkeratinocyte differentiation
GO:0030336Pnegative regulation of cell migration
GO:0032092Ppositive regulation of protein binding
GO:0032874Ppositive regulation of stress-activated MAPK cascade
GO:0033138Ppositive regulation of peptidyl-serine phosphorylation
GO:0035329Phippo signaling
GO:0036481Pintrinsic apoptotic signaling pathway in response to hydrogen peroxide
GO:0042771Pintrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0042803Fprotein homodimerization activity
GO:0043234Cprotein complex
GO:0043524Pnegative regulation of neuron apoptotic process
GO:0043539Fprotein serine/threonine kinase activator activity
GO:0045464PR8 cell fate specification
GO:0045600Ppositive regulation of fat cell differentiation
GO:0046621Pnegative regulation of organ growth
GO:0046666Pretinal cell programmed cell death
GO:0046777Pprotein autophosphorylation
GO:0048471Cperinuclear region of cytoplasm
GO:0048679Pregulation of axon regeneration
GO:0051683Pestablishment of Golgi localization
GO:0060215Pprimitive hemopoiesis
GO:0060253Pnegative regulation of glial cell proliferation
GO:0060800Pregulation of cell differentiation involved in embryonic placenta development
GO:0070062Cextracellular exosome
GO:0070613Pregulation of protein processing
GO:0072089Pstem cell proliferation
GO:0090090Pnegative regulation of canonical Wnt signaling pathway
GO:0090168PGolgi reassembly
GO:0097202Pactivation of cysteine-type endopeptidase activity
GO:0097284Phepatocyte apoptotic process
GO:1902043Ppositive regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:1903205Pregulation of hydrogen peroxide-induced cell death

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11912ppkA; serine/threonine-protein kinase PpkAEC:2.7.11.1 Bacterial secretion systemko03070
Biofilm formation - Pseudomonas aeruginosako02025

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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