result

Gene information

Detail information of AfisC8G00441

Location

Gene	Chr	Start	End	Strand
AfisC8G00441	chr8	81701225	81703403	-

Sequences

CDS

Protein

Gene

>AfisC8G00441
ATCCTTCTTCCATCCATTTCTCACTTATTTATACATATTTCATTTTCAGCAACATAGTATTGCGTCTAAATAATAATAATAACAATTAATAATAACAGAGCTCCATGCTCATGAATTTAGACCAAATGGGTTGCAATGGATCTCCATTTTTCCCTCCTAACTTCCTTCTGCAAATTCAAACGCCTCATGAAACTACAGAAGATCATCATCGACGACAACAGCAAAATACAAATCCTTTTTCCTCTCCGCTCCATACCAATCCCGAAGAATTTAGAGGTATAAAACTGCTTGCAATTAGTAAAACGTTAGGTTGACTTCATGGTTAATTTTACATTTTTATTGAACTTACTTTGTAGGTATGGCTACAATGCTAGGGAAAAGATCGATGTCGTTTTCAGGCATCGAACCATGCGATGAAATGAACGGAGAAGATGACATTTCAGACGACTGTTCTCAGTTGATAGGGGAGAAGAAAAGAAGACTTACCATAGAACAAGTTAGGACTTTAGAAAAGAGTTTCGAAGTAGGGAACAAACTGGAACCAGAGAGGAAAATGCAACTGGCAAGAGCACTTGGGCTTCAGCCCAGGCAGGTTGCTATTTGGTTTCAAAACAGAAGAGCTAGATGGAAGACAAAGCAATTGGAGAAGGATTATGAGGTGCTTAAGAGAAAATTTGATGCTGTTAGAGCAGAGAATGAGTCTCTTCTCTCCCAAAACAAAAAACTTCAAGCTGAGGTGATTTAACTGATTATCATATGTTATAACTCTACTATGGTTTCAATATTAATTAGTCATTAAAACGCACTTGAAAAGGTAAAGATCTACTAAAGAAGACATGTTCGTGTGTCCATTTTTACTTTACATGATCTACTTTGGGATTAGTAATAAATTTGTGTTTTGAAGTTTGAATCTTTTGAGAAAGAAAAAGGTTTTTTTTTTTTGCCCCAATCATTGATGTATCATAGTTTCTATCTTTTCATCTTTCATTAAATTTCATACTTTTTATATCACTATTCAAGATAAGAAATACCATCTGTTAGTAACAATTAATTTCATCTTTGTTGGCTCATCACATTTATTTTTGTTTCGAGAAAAGAGATCTATAATTTTGTTATAATAACACTGGATTGTTCACAGAAGTGTCTATTTCAGTGGGATGTCCAGCCATTTAATTAGCCACTGAACTAATTAATTGCTTCAGAACTTTGCTGTCTCATTTCACAACAACAATCTCCTCATGGACCATTTCCAGAATTCGTTATTATTTTTTCCCTTTAAGTAAATCATCTCTTCTAGAATATTGTTTATCTTGTTGAAGCTATTGGTTACTAATACATATTATTACAGATAATGAATCTTAGTGGAAGAGAACCGACTTCGGAGCTTATAAACCTGAACAAAGAAACTGAGGGATCATGCAGCAACAGAAGCGAAAACAGCTCCGAAGTTAATTTAGATTTATCAAGAACACAGACAATAGAAAGCCCCATCGATGATAATAATGATAATAGCAAGAATAATGTGCATCAAAGCATTACGTTCTTTCCATCAAGTATAAGACCACCTTCTATGATTCACCTTCTACACAATTCGAGTACTAGGGAAGAGTTACAATGCCCGAAAATAGAACAAAGTGGGGTACCCGATGAAAACTTTAGCAATTTGTTATGTGGTATGGATGATCAATCTGCATTTTGGTCGTGGTCGGATCATCAAAGTTTCCATTAAGTTTGAATATTTGATGGAGGGATGACAGTTGAGAAATCTATATATATGATGGCTATTGGTTTATCATTGAGTGAAGAGGACTACGAAGGTACAAGAAGAATAAAAAGTACTTTTCTTATATGTTTGGTACTGATTAGTAGAGTTTATACAAAGCTCTTAATTGCTTCTTTTCTCCTATTGAATCTACTACTATTTACTGATGCAGCTGTGAAATAGTGTTATTGTGATATGAAAGTATGAAACAACCTAGTTTCTATAGAACATTAAGTTTTTGGTTTCTTGCATATGTATCATCATGTGTGAGCCGTGCATTAAATAATTAAATTAAATTATTGTTTGTTACTTGTTATAACTACTGTTGTTCACAAATATTCTATTGTTATTCATTTACTCCAATAATGTGAAATGAAACACACATAGACATATTGTTGTATTCATAACTACTTTTTC

Functional annotation

Database	accession number	e-value	annotation
nr	ONK65242.1	8.9e-82	uncharacterized protein A4U43_C07F35130
Swissprot	Q8S7W9.1	7.2e-44	OsHox21
trEMBL	D6MKG5	1.6e-85	Homeobox-leucine zipper protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G69780.1	55.73	7e-66	247	ATHB13	Homeobox-leucine zipper protein family

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G00441	AT1G69780.1	262	92	9	1	252	47	294	55.73	7e-66	247
AfisC8G00441	AT1G26960.1	256	83	7	4	252	37	255	50.39	2e-57	218
AfisC8G00441	AT3G01220.1	246	106	9	8	247	55	275	44.31	2e-48	188

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	38	91	59.0	2.7e-16
PF02183.15	HALZ	Family	93	133	55.5	4.2e-15

Gene Ontology

Accession	Ontology	Name
GO:0001558	P	regulation of cell growth
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009637	P	response to blue light
GO:0009651	P	response to salt stress
GO:0009739	P	response to gibberellin
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009908	P	flower development
GO:0009965	P	leaf morphogenesis
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0042803	F	protein homodimerization activity
GO:0043565	F	sequence-specific DNA binding
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network