result

Gene information

Detail information of AfisC8G00524

Location

Gene	Chr	Start	End	Strand
AfisC8G00524	chr8	96826445	96827276	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	RHN65706.1	1.9e-25	putative response regulator and transcription factor RR-A-type family
Swissprot	B8BLZ4.1	1.7e-26	OsRR10
trEMBL	A0A2I4GZW3	1.4e-25	two-component response regulator ORR9-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G57040.1	72.60	5e-28	119	ARR9;ATRR4	response regulator 9

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Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC8G00524
Allium sativum	Asa4G02172.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	1	57	32.3	8.2e-08

Gene Ontology

Accession	Ontology	Name
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0005515	F	protein binding
GO:0003677	F	DNA binding
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009793	P	embryo development ending in seed dormancy
GO:0010161	P	red light signaling pathway
GO:0042752	P	regulation of circadian rhythm
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14492	ARR-A; two-component response regulator ARR-A family	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network