result

Gene information

Detail information of AfisC8G00734

Location

Gene	Chr	Start	End	Strand
AfisC8G00734	chr8	140744464	140750205	+

Sequences

CDS

>AfisC8G00734
ATGAGTTCTGGTGATGAGCAAGATGTTCATGAGAGGAAGAAGAAAAGATACCATAGACACACTCCCAGACAAATTCAAGAGCTTGAATCGATGTTCAAGATGTGTCCACATCCCGATGACAAGCAAAGAATGCAACTGAGCAGAGATTTAGGGCTGGAACCAAAACAGATTAAGTTTTGGTTTCAAAATAGAAGGACCCAAATGAAGGCACAACATGACAGGCAAGATAACTGCTCCCTACGCGCTGAAAATGACAAAATCAGGTGTGAAAATATCATGATTCGAGAAGCTCTGAAGAACATAATCTGCCCTCATTGTGGTCCGTCAAACTGCGAAGATTCTTACTTTGATGAACAGAAACTTCGGATGGAGAATGCTCGACTAAAAGATGAGCTTGATAGACTGTCAAGCATAACATCGAAGTACCTAGGAAGACCAATAACTCAACTTCCACCAGTTCATCCCACCTCTGTCACTTCACTAGACCTATCAGTTGGAAGTTACATCAATCCAAGCTACGGACATTCTTTGAACCTCGACCTCCACTCCATCAGTAGCAATTCTTCGATGATACCTTCACTCCCTAATTTGCCAACTCCACTCTCGGACAATGAGAAGGCCCTAATGGCCGGGCTAGCAACGAATGCAATGGATGAACTTATAAAACTTATTCAAACTGATGAGCCTCTTTGGATCACGACATGTAATGATGGTAAAGAAGCTTTAAACCTTGACAACTATGATCAGATTTTTCCAAAACCCGGGCGTCGGTTTTTAGACCCTGAAATTAGGGTTGAGGCATCAAGGAGTTCAGGGCTAGTGTTTATTAGTCCTGTTGCTTTGGTTGATATGTTCATGGACTCGGATAAGTGGATGCAATTGTTCCCAACAATCATTTCTAAGGCGATAACATATGAAGTTCTTGCAAATGGAGTTGGTGGAAGCAAAAATGGCTCATTATTACTGATGTACGGAGAATTTCAGATACTATCTGCCGTTGTACCCACTCGAGAGTTCATATTTCTTCGGTATTGCCAGCAGATAGAGCAAGGACTATATGGAGTAGTTGATGTATCAATTGATTTACCAAGAGATCCTAGTCAATTGGGGCCACCACTTTCTAGAACCAAAAGGCTTCCATCTGGTTGTCTTATTCAAGAAATGCCCAATGACTACTCAAAGGTTTCTTGGGTTGAGCATATGGAAATAGAAGATAAGATACAAACACACGGATTGTTTCGTGATTTAGTAGAAAGTGGAACAGCTTTCGGAGCTCAAAGATGGTCAACTACCCTACATAGAATGTGTCAGAGGCTTCACTGCTTTGTCGCCACGGAACCAAATAGTAGGGATATTGGAGCAGTGATTCCTACACCTGAGGGAAAAAGAAGCATGATGAAACTATCACAAAGAATGTTGAACTTGTTTTTCAGTAGTTTAAGCCCTTCAAATGTTAATCAATGGAACACTCTCTCGGACCTTAACGAAGTCAGAGTTCGAGTCATTGGTCAACGTAGTTCGGAGATCGGTCAGCCTAATAGGAACATTCTTAGTGCAGCCACTTCTATTTGGCTGCCCTTGTCATGTCAGAGACTGTTCAATTTCTTCAAGGATGAAAGAACCCGTGCTCAGTGGGATATTCTGTGTCATGGCAATATGGTGCAAGAAGTCACAAATATTACAACTGGTTTCGACCCAGGGAACTCCATCTCTCTTCTTCGTACATGCACGCCAGACCAAAACAGCATGCTTGTGCTTCAAGAAACATGCACGGACGAATCTGGATCGATCATAGTGTACGCTCCAATCGACCTCCAGTCAATAAACATAGCGATGAGCGGAGAAGACACATCAAACGTTCCTCTTCTACCTTCAGGATTCGCCATCGTCCCAGACGGCCGTTCACCAAAGTCCCACATTGTGAGCTCAGCAGCATCGACAAGCACAAACCCACTGCCACCTGTCATGCCCGGATCGATCCTCACAATCTCTTTCCAAATCCTGGTCAGCAACTACCCCTCTGCCAAGCTCAACTCCGAATCAGTAGAGACAATAAGCGGTCTCATCACCAACACAGTCCATCATATAAAATCTGCATTAAATTGTGCTTAA

Protein

Gene

>AfisC8G00734
GCAAAATTTCCTATTTTCTTCATTAATGAAAGAGAGCAGTGATACATGCCTCACATTTCTCTCTTTCCTTCACTCATCTACTACAAATTCATACTACTGTCAGAAATCAATTTCAAAAAAGACGGAAATTTATTTTTGAGCTTGCGATTCAATGAAAGAGCGTAACTATTGATTATTCTAAGCCTCCATTCCAAAAAAGTTATCAACTTTATAAAACCCATCTCTTCATTTTGCTTTATTTGTTAGCTTGCGATAAGTTTTTTTTTTAAGTTAGCGAGAGGTAGAAGAAGCCGAAGAGAGAGAAATGAGTTCTGGTGATGAGCAAGATGTTCATGAGAGGAAGAAGAAAAGATACCATAGACACACTCCCAGACAAATTCAAGAGCTTGAATCGTATGAAAGTTTAATTATTTTGAATCATCTGAAATTTTGGGGTTTGATATTTAACGATACTTTTTTTCTCTCCCTTTTTTCCCTGTAATTTAGGATGTTCAAGATGTGTCCACATCCCGATGACAAGCAAAGAATGCAACTGAGCAGAGATTTAGGGCTGGAACCAAAACAGATTAAGTTTTGGTTTCAAAATAGAAGGACCCAAATGAAGGTAATTCTTTTTATGTACAAATGTTTCTTGGATTAGAGTTTGATTTGAAAAGGACTTGTTCCCTTTTATTTTCCCTAAACTATCCGTTTTTGTTTGTATTCGTGGATATCATGGATTCTATCAATACAATCTAGATGAATGGATATTTCGTATGAAGTTCCTTCAAAAGTTTTTTGTTTTTTTGAAGGACATATAAAGAAGTGTTTAAGAAGGATATCAAATTACATTTTTTTTTTAATTTTAAGCAAAGATAATCTTGTGCTAGAGTCACTTCAAAAAGATTTGCATGATATCTTAACTGGAAGTTTACTGTGCACTTAAAAATATTACCACAAAAACCAGAAAAGTGCAGAAAAAACCCTTATAATCTTATGCAAGTTTAGCATACTTATTTCTGATTAGATGATGTAAATTGAAGCTCTAAGGAACAAAAATGATGATTTTCTTTGATCAGGCACAACATGACAGGCAAGATAACTGCTCCCTACGCGCTGAAAATGACAAAATCAGGTGTGAAAATATCATGATTCGAGAAGCTCTGAAGAACATAATCTGCCCTCATTGTGGTCCGTCAAACTGCGAAGATTCTTACTTTGATGAACAGAAACTTCGGATGGAGAATGCTCGACTAAAAGATGAGGTTATAAATTCGCTTTGATGCAACTGTTTGTTTATCGTAGCAAAATGCCAAATAGACAATCATGATTTTTTGGTGGTTAAATGCCATCTTTCAAAGCATTTATGATGATCAAGCTGATATTGGCAGCGGATATACGTTTGTATAGTGTCTTGAAAATCATTGTTAAGTTAACTAAATTTATTCATATCCTGCTCATAATAAGAACAAGAGATCGTTCTTGCTATACAAACTGCATGGCTTGAACACTACCCATCTTTATACGAGTAAGCCTATAATTTTATGTTAACTTGTTGCTGTCATGACTCCCATCTGTAATCTTTAGGACTAGCACTCGCACGTCTCATTAATATCTTGGTTAATAAAAGAGATTCACGGTGTGGAAGCATTATATAAATGTGTAGTATAATTATATAGTTGAGAAATTATTGATATTTATTGCAGTTGATTTATGCTGCCTCAATTTATTGTTGAAATTGATCTTCACTGTTCATACCAGTGCTTTTTAAATGCAATGTTTTAGATTTTGAATTAAAACTTCTGCACACAATGATGAAACATAGATAACTTGTTAGTAACTTACTTTTTGTTAAAGTTCATTTAACACACTAAAAGTGGATACAAATCATACAGTGAACTTATCTAACGTCATTGATTCTTAGTCCTTAAAAGCATATTCAAAAAACTAAAGTTATTTGAACAATTACGTCACTATAATAGCATGTTGATGGGTCAATTTCATTGAATTTTTTATTTTTATTTTTGTGTGTGCTTTATAACAATGCTCAATTTTATTTTTCAATTATTTCTTCTAAACTTGGCTATAATATATTCCAAGGAGAAGACTTTCAGCTGTACAACCAAATGTTTTGCTACGATCATCATCATTCATTAGTCATTTTACTGTTCTTTATGCATATATACATGCGTATTCTTTATCCATGACCACATCATTAAGTAGTTAAACATTCTCAGTGTGAAATGAAACAGAAATATACTGTAAATGCAGCTTGATAGACTGTCAAGCATAACATCGAAGTACCTAGGAAGACCAATAACTCAACTTCCACCAGTTCATCCCACCTCTGTCACTTCACTAGACCTATCAGTTGGAAGTTACATCAATCCAAGCTACGGACATTCTTTGAACCTCGACCTCCACTCCATCAGTAGCAATTCTTCGATGATACCTTCACTCCCTAATTTGCCAACTCCACTCTCGGACAATGAGAAGGCCCTAATGGCCGGGCTAGCAACGAATGCAATGGATGAACTTATAAAACTTATTCAAACTGATGAGCCTCTTTGGATCACGACATGTAATGATGGTAAAGAAGCTTTAAACCTTGACAACTATGATCAGATTTTTCCAAAACCCGGGCGTCGGTTTTTAGACCCTGAAATTAGGGTTGAGGCATCAAGGAGTTCAGGGCTAGTGTTTATTAGTCCTGTTGCTTTGGTTGATATGTTCATGGACTCGGTTAGTTCTCTTATTTATCATCATTTCTTCCTATACATAACGTGTTGTAAGTACATGCAAAGCTTCAAGATTTACACTTTAGCACCATAACTTGATATGTATAAGTTTATAACAACCATGTATAGATTTTTGAAGTTGTTTTTTTCATAGGATAAGTGGATGCAATTGTTCCCAACAATCATTTCTAAGGCGATAACATATGAAGTTCTTGCAAATGGAGTTGGTGGAAGCAAAAATGGCTCATTATTACTGGTAAATGCAAATATAGCTTTCAATGTGTGCGCGTGTGTGCGTGTGTTATAAAACCAGATTACATTGCTTCAACCTGTAAATTTTTTATTGCAGATGTACGGAGAATTTCAGATACTATCTGCCGTTGTACCCACTCGAGAGTTCATATTTCTTCGGTATTGCCAGCAGATAGAGCAAGGACTATATGGAGTAGTTGATGTATCAATTGATTTACCAAGAGATCCTAGTCAATTGGGGCCACCACTTTCTAGAACCAAAAGGCTTCCATCTGGTTGTCTTATTCAAGAAATGCCCAATGACTACTCAAAGGTATTTATATGCCCTTTCTTCATATTTCAAGTTAATTTTTGATTCGACTAATTTTGTAAAGAGCTATAAAATCAGGAGTTTTCAATTGATTTTTCAGGTTTCTTGGGTTGAGCATATGGAAATAGAAGATAAGATACAAACACACGGATTGTTTCGTGATTTAGTAGAAAGTGGAACAGCTTTCGGAGCTCAAAGATGGTCAACTACCCTACATAGAATGTGTCAGAGGCTTCACTGCTTTGTCGCCACGGAACCAAATAGTAGGGATATTGGAGCAGGTAAATTATTGATATGCGAAAATTACAACATAAAAATTTCCATGTTATTGACAAATATTCAGTTAGCTCATTTAGCTGTAATGTGTGTTGATGCTGATACAGTGATTCCTACACCTGAGGGAAAAAGAAGCATGATGAAACTATCACAAAGAATGTTGAACTTGTTTTTCAGTAGTTTAAGCCCTTCAAATGTTAATCAATGGAACACTCTCTCGGACCTTAACGAAGTCAGAGTTCGAGTCATTGGTCAACGTAGTTCGGAGATCGGTCAGCCTAATAGGAACATTCTTAGTGCAGCCACTTCTATTTGGCTGCCCTTGTCATGTCAGAGACTGTTCAATTTCTTCAAGGATGAAAGAACCCGTGCTCAGGTTAACACTCTCATATTTTTCTCACTGATATTTTCTTTCAAATTCATAAATGTTTTCACTATCATACCAATATGGTGCATGGTAATAACAAAAAAAAGAAAATAAATCAAATTTACAGTTTGATTCTACTCATAACCTGCAGTGGAAGCTACTGCTTTCTGCAATCTCTAACATAAGAAGAATGATGACCCTAAAATATAATAGCACAAACCCTAAATCGATCTGATTTGAATAGAAATATAAATTAGGGGAAGAGAATACATACAATTCAAAGAGGGCAGAAAGTAGAATATAATGATCACAATACTTTTAAGGGTTGAATAAGCTACTGTTTAAAGTTTTAAAAGCGGGATTTTTAGTTTTTTGATAACATATAGAATATTATTGTGATGCACCACTAAAAGTTAAACACTGAAGTGAGAAATGGTAGTTCACCAGTGCTGGCTACTAAAATTTCAAAAATAAATGTGGGAATATTTAAACACTACTCATCGTAATGGTTAACAATATGAAACAATAAAATTTCATACAGATAAAATAAATTTATACAGCATTTAAGGTTAATATTCAGTTTTTACTATATATACAGTGGGATATTCTGTGTCATGGCAATATGGTGCAAGAAGTCACAAATATTACAACTGGTTTCGACCCAGGGAACTCCATCTCTCTTCTTCGTGTAAGTTCTCTTCCTATAAAATCTTTGACTATAATCACCTACCTGCTCTGGTTGTTAACTATGAGCGACTTAAGGAAAAACTGATGCATTTTAGCAAGAAACTGATCAAGGTTTTTAACTATGAGTGTCCGTAAGCAGTCAAATCATCATTTCTAACAAGCAGCCTGTTTTCTGTGCATCTGATATTTGGATGCTAAATTTATCCTACACTCATAGTAACAAGTTGCTATTTTAAGCAGATTGCTCATCATGAACTATTTACATAAAAAGAACATAAATGCGAGGTCTGCATCTATCAACTATTTCTTAACTGAAAAATGTTTGCATGTACCAGCTAGACACATGTTAAGATCGTGTATTTACATTTTTTTTTGGGTGGTTAGTGGTTATTAACATGTATTGGTAACATAAACCTTTTAATTATAATTTCACAGACATGCACGCCAGACCAAAACAGCATGCTTGTGCTTCAAGAAACATGCACGGACGAATCTGGATCGATCATAGTGTACGCTCCAATCGACCTCCAGTCAATAAACATAGCGATGAGCGGAGAAGACACATCAAACGTTCCTCTTCTACCTTCAGGATTCGCCATCGTCCCAGACGGCCGTTCACCAAAGTCCCACATTGTGAGCTCAGCAGCATCGACAAGCACAAACCCACTGCCACCTGTCATGCCCGGATCGATCCTCACAATCTCTTTCCAAATCCTGGTCAGCAACTACCCCTCTGCCAAGCTCAACTCCGAATCAGTAGAGACAATAAGCGGTCTCATCACCAACACAGTCCATCATATAAAATCTGCATTAAATTGTGCTTAACGTAAAAAGAAAAGAAAGAAGAAGAGAGCAGGAAGGAAGTCAAGAACGCACCATACATAGATTTATATATCGGTCATGGTTCGGGCATTGACTTCCGTTCAATGAAGAAGAAGATACATTTATGATGACATTAAATTGAGGTGTTAAAATTATATGTAAGATTGTTTTATGATGGTGACCAACTGAACTTATGAGGGGAAGGTCCATTGGCTTTTATTGTGGAATCTATTATGGAACATTTATGTTTGTGGTGTTGGTTCTATTTATGTGAGATGTTGACTGCTATTGTTTATTTATTTTGCTCTTCC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256822.1	3.4e-280	homeobox-leucine zipper protein ROC8-like isoform X1
Swissprot	Q69T58.2	7.2e-219	Protein RICE OUTERMOST CELL-SPECIFIC 8
trEMBL	A0A5P1FA69	2.4e-280	Homeobox-leucine zipper protein HDG11-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G73360.1	54.64	0.0	752	AtEDT1;ATHDG11;EDT1;HDG11	homeodomain GLABROUS 11

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G00734	AT1G73360.1	701	292	10	11	701	30	714	54.64	0.0	752
AfisC8G00734	AT1G17920.1	698	286	13	16	702	24	683	52.01	0.0	701
AfisC8G00734	AT4G04890.1	725	321	21	3	702	49	737	47.31	4e-180	628

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00046.26	Homeobox	Domain	14	69	66.0	1.8e-18
PF01852.16	START	Domain	214	438	138.3	2e-40

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009828	P	plant-type cell wall loosening
GO:0009845	P	seed germination
GO:0009913	P	epidermal cell differentiation
GO:0010091	P	trichome branching
GO:0042335	P	cuticle development
GO:0043481	P	anthocyanin accumulation in tissues in response to UV light
GO:0048497	P	maintenance of floral organ identity
GO:0048765	P	root hair cell differentiation
GO:0048825	P	cotyledon development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09338	HD-ZIP; homeobox-leucine zipper protein	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network