Detail information of AfisC8G00984


Location
GeneChrStartEndStrand
AfisC8G00984chr8196851878196869302-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256079.11.7e-225uncharacterized protein LOC109832971 isoform X1
SwissprotF4IXE7.12.2e-100Repressor of silencing 4
trEMBLA0A4S8KFA67.9e-196PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G14920.142.623e-156 550Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16135.2JasFamily58866089.41.1e-25
PF00628.26PHDDomain70274430.12.9e-07

Gene Ontology
AccessionOntologyName
GO:0000122Pnegative regulation of transcription from RNA polymerase II promoter
GO:0000792Cheterochromatin
GO:0000977FRNA polymerase II regulatory region sequence-specific DNA binding
GO:0001221Ftranscription cofactor binding
GO:0001228Ftranscriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0002039Fp53 binding
GO:0002458Pperipheral T cell tolerance induction
GO:0003682Fchromatin binding
GO:0003713Ftranscription coactivator activity
GO:0016020Cmembrane
GO:0004386Fhelicase activity
GO:0004402Fhistone acetyltransferase activity
GO:0005829Ccytosol
GO:0004713Fprotein tyrosine kinase activity
GO:0016567Pprotein ubiquitination
GO:0005665CDNA-directed RNA polymerase II, core complex
GO:0005719Cnuclear euchromatin
GO:0005726Cperichromatin fibrils
GO:0005730Cnucleolus
GO:0005856Ccytoskeleton
GO:0006959Phumoral immune response
GO:0008094FDNA-dependent ATPase activity
GO:0008270Fzinc ion binding
GO:0008285Pnegative regulation of cell proliferation
GO:0042802Fidentical protein binding
GO:0009506Cplasmodesma
GO:0010385Fdouble-stranded methylated DNA binding
GO:0042981Pregulation of apoptotic process
GO:0016581CNuRD complex
GO:0016604Cnuclear body
GO:0016922Fligand-dependent nuclear receptor binding
GO:0017015Pregulation of transforming growth factor beta receptor signaling pathway
GO:0021895Pcerebral cortex neuron differentiation
GO:0030163Pprotein catabolic process
GO:0030218Perythrocyte differentiation
GO:0030514Pnegative regulation of BMP signaling pathway
GO:0031647Pregulation of protein stability
GO:0032602Pchemokine production
GO:0033333Pfin development
GO:0034056Festrogen response element binding
GO:0034243Pregulation of transcription elongation from RNA polymerase II promoter
GO:0035093Pspermatogenesis, exchange of chromosomal proteins
GO:0035166Ppost-embryonic hemopoiesis
GO:0036091Ppositive regulation of transcription from RNA polymerase II promoter in response to oxidative stress
GO:0042826Fhistone deacetylase binding
GO:0043967Phistone H4 acetylation
GO:0043971Phistone H3-K18 acetylation
GO:0043972Phistone H3-K23 acetylation
GO:0044030Pregulation of DNA methylation
GO:0044154Phistone H3-K14 acetylation
GO:0045060Pnegative thymic T cell selection
GO:0045595Pregulation of cell differentiation
GO:0046777Pprotein autophosphorylation
GO:0048066Pdevelopmental pigmentation
GO:0055074Pcalcium ion homeostasis
GO:0060215Pprimitive hemopoiesis
GO:0060850Pregulation of transcription involved in cell fate commitment
GO:0061628FH3K27me3 modified histone binding
GO:0061630Fubiquitin protein ligase activity
GO:0070410Fco-SMAD binding
GO:0070412FR-SMAD binding
GO:0070562Pregulation of vitamin D receptor signaling pathway
GO:0070577Flysine-acetylated histone binding
GO:0070735Fprotein-glycine ligase activity
GO:0070739Fprotein-glutamic acid ligase activity
GO:0071391Pcellular response to estrogen stimulus
GO:0080188PRNA-directed DNA methylation
GO:0097536Pthymus epithelium morphogenesis
GO:0098532Phistone H3-K27 trimethylation
GO:1901798Ppositive regulation of signal transduction by p53 class mediator
GO:2000410Pregulation of thymocyte migration

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.