Gene information

Detail information of AfisC8G01011

Location

Gene	Chr	Start	End	Strand
AfisC8G01011	chr8	200816159	200817008	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010938043.1	6.1e-25	ethylene-responsive transcription factor ERF069
Swissprot	O04682.1	1.0e-24	PTO-interacting protein 6
trEMBL	A0A8K0N031	1.1e-25	Pathogenesis-related genes transcriptional activator PTI6

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G27950.1	48.91	1e-26	115	CRF4	cytokinin response factor 4

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G01011	AT4G27950.1	137	49	3	12	129	41	175	48.91	1e-26	115
AfisC8G01011	AT1G71130.1	155	65	3	12	145	3	157	44.52	1e-24	108
AfisC8G01011	AT4G11140.1	137	59	3	8	128	7	143	45.26	1e-22	102

Ortholog group

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	70	121	44.6	1.2e-11

Gene Ontology

Accession	Ontology	Name
GO:0001944	P	vasculature development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005730	C	nucleolus
GO:0042802	F	identical protein binding
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009733	P	response to auxin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009789	P	positive regulation of abscisic acid-activated signaling pathway
GO:0010104	P	regulation of ethylene-activated signaling pathway
GO:0010186	P	positive regulation of cellular defense response
GO:0010200	P	response to chitin
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0034059	P	response to anoxia
GO:0042991	P	transcription factor import into nucleus
GO:0043565	F	sequence-specific DNA binding
GO:0048364	P	root development
GO:0048825	P	cotyledon development
GO:0051301	P	cell division
GO:0071497	P	cellular response to freezing
GO:0090332	P	stomatal closure

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network