Detail information of AfisC8G01031


Location
GeneChrStartEndStrand
AfisC8G01031chr8207338064207350148+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020273956.12.3e-194cyclin-dependent kinase D-1-like
SwissprotP29620.16.0e-179CDK-activating kinase R2
trEMBLA0A5P1ECV01.7e-194[RNA-polymerase]-subunit kinase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G73690.173.439e-168 586AT;CDKD;1;CAK3AT;CDKD1;1cyclin-dependent kinase D1;1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain41321249.14.1e-74

Gene Ontology
AccessionOntologyName
GO:0000079Pregulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082PG1/S transition of mitotic cell cycle
GO:0000086PG2/M transition of mitotic cell cycle
GO:0000990Ftranscription factor activity, core RNA polymerase binding
GO:0003713Ftranscription coactivator activity
GO:0006363Ptermination of RNA polymerase I transcription
GO:0005739Cmitochondrion
GO:0005829Ccytosol
GO:0004693Fcyclin-dependent protein serine/threonine kinase activity
GO:0005524FATP binding
GO:0006283Ptranscription-coupled nucleotide-excision repair
GO:0006294Pnucleotide-excision repair, preincision complex assembly
GO:0006361Ptranscription initiation from RNA polymerase I promoter
GO:0006362Ptranscription elongation from RNA polymerase I promoter
GO:0006367Ptranscription initiation from RNA polymerase II promoter
GO:0007050Pcell cycle arrest
GO:0008022Fprotein C-terminus binding
GO:0008094FDNA-dependent ATPase activity
GO:0008283Pcell proliferation
GO:0008353FRNA polymerase II carboxy-terminal domain kinase activity
GO:0009299PmRNA transcription
GO:0019912Fcyclin-dependent protein kinase activating kinase activity
GO:0030154Pcell differentiation
GO:0030521Pandrogen receptor signaling pathway
GO:0042795PsnRNA transcription from RNA polymerase II promoter
GO:0045448Pmitotic cell cycle, embryonic
GO:0050681Fandrogen receptor binding
GO:0051301Pcell division
GO:0070985CTFIIK complex
GO:1900018Pphosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex
GO:1901921Pphosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex
GO:1903654Pphosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K02202CDK7; cyclin-dependent kinase 7EC:2.7.11.22 2.7.11.23 Basal transcription factorsko03022
Nucleotide excision repairko03420
Cell cycleko04110

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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