result

Gene information

Detail information of AfisC8G01067

Location

Gene	Chr	Start	End	Strand
AfisC8G01067	chr8	212975326	212977388	-

Sequences

CDS

Protein

Gene

>AfisC8G01067
ATGAATTCAAATCCTGTTACCAGGAATGAAGAAATCGGTTCTCCTACCGACTCAAATTCACTCTCGCTCTCAATGAGGGAAATTGAGCATAGTCTATTTTTAGAAAAGCAAAAAAACCAGCTACTGAAAACTGAAATGGAGCTTTCAAATTTGGTTGCATGTCAAGAAATTAACAAGCTAAAAAGAGAAATCGAGCGTCTCCAGGACAATGTATCTAGATTAGAAGAAGATCGCAACCTACTTAAGCTGAGAGAAGCTAAATATGAAGAAAGGGCAAAACAGTATCTTGAAAAAATTGAAGAGAATGAAAAAGAGTTCGCAGAGAAGCTTACTGAAGTAAAGATGAAGAATTGGGATCTTAACCTTGCTCTTCATGCATATACCAAGAAATGTGAGGGCCTTGTAGAAGAAAATAGCAGACTTAAAGGAAAAGAGATTGTAGATTGTGATGAAGAAGAGATGGTTTTGATTCACCAAATTAAAAAGAGGAAACATGAAGATTTGGTTAAGAATGTTGCAAATACTTCATCAAACTCAAGCATTAGACAAAGTGGGTTGGGAAAGTCCGAAGCAAATGAAACATCAGTTGATTTCAAAGATTCACATATTCCACTAACTCCGGCAAAAAACAATGATACGGTCTGTACATGAACTTTTTCTCATTTTGTTTTTTAATTAACATAGGTTAAAGGTTTCAATTTTTGCAAAAGTTATTGAATTAGTATGGTTATGTTCAGAAAAGTAGAGGAAGCTGCAGTCAGCAGCAGAAGTCTAAGAGCATCTCCAACAGTTTGAAGTGTGGAAATTCGATTTTCCGCACTCCAAAATGTTGGAGCCCTCGCCTCACTCTATTATAATTTCTCAGCCCGAAGGCCCTTCTTTCTGCACTATTGCAAATTCTCGCACTCTGTTGGGGATGATTTCGGGTGCGGATTTGAGAATTTGCAATCTGTTGGAGATGCTCTAAAGAGTTTGATTCCGTAAGTCCTCAAACCGGAAGAAAATCTGGAAAAGTTAGATGTGGTGTAAGTTGCCATGCTCTTTTGTTGCTTGTACAAACCATTTATAAATCATCTCGCACACAATACATCTCCAAAAATATTAAAAAGTAAAATGAAAACGAGATATTGTAAAGCTCAGCTATATCTGACCATTGAGTTTTTTTCAGGTTGTTGTCAATGGGGTTCAAACTTACTACAAAAGGTCGATATTTGTTTATGTATATGTTAGGTAAATATCCAAACATATAACAGTAGATAATAAACTTTTGAATCACTGAATCAGAGGTAGCTATAGCGAATACACTGGACGAACTGCAAGTTCGAAACAACTTGAGAGTGCTTTGAAAAGAGCAAACACACTTCAGAAAAATTTGAGAGACTGCAACCTCTCGTTTGTTAAGCCTATGGTTAAGTCTCATGTGTCCAGTGGCTTCTGGCTTGTATGTCGCATATCCTTGTAAAACATGTCTCTTTGTATCTGTAAAATACTCTTATAATTTACGGTTTGACTCGTGAATTTTGTTTTTCCTAACTTTAGAGCCTTCCTTCGAAATTTTCTAAGGAGAACCTATCTCATATCACTGAACAACTCATCATGATCTTAGAAGACGAGGATGGTTTGGAATATGAATCCAATTGCATTCATGTCACTCGGCATTATGGACTTAGTGGTGGATGGAGAGGTTTCGCCATTGACCATAAATTAGAAGTTGGAGATGTCTTAGTGTTTGAATTGTGTGAACCGGCAAGATTTAAGGTAAAAGTTTCTGTTCAAGATATTTATGTACATGATTTATCTTTTTTGATAGTTAATTAGTTTCATGGTCCTGTAAGGGCAATGGTACAGAAATCAATATGTTTCTAGTTGTGGTCTTACAGGTTCAAATGCCAACAAACATCTTGGAATATATTTATTCAAACCTGTTAGTTTTCGATTATGACCAGAATTGTACACTTGAAATATATTTGTTTCAAAACAAAGGTCACTGCAAAATCAAAAAATGTCCTTACTCCCGTTACGTGGTGTGGCCATACAGGTTTGAATCTGAAACCGCCATTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273931.1	1.0e-29	B3 domain-containing protein Os05g0481400-like isoform X3
Swissprot	Q5KQI4.1	1.6e-27	B3 domain-containing protein Os05g0481400
trEMBL	A0A5P1FLE5	7.3e-30	TF-B3 domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G42700.1	41.14	5e-23	105		AP2/B3-like transcriptional factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G01067	AT5G42700.1	175	81	5	192	360	37	195	41.14	5e-23	105
AfisC8G01067	AT3G19184.1	109	50	3	253	360	112	215	48.62	3e-21	99.8
AfisC8G01067	AT5G58280.1	156	78	4	211	360	66	212	40.38	7e-21	98.6

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02362.18	B3	Family	271	358	62.8	2e-17

Gene Ontology

Accession	Ontology	Name
GO:0006351	P	transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network