result

Gene information

Detail information of AfisC8G01453

Location

Gene	Chr	Start	End	Strand
AfisC8G01453	chr8	297765937	297767693	+

Sequences

CDS

Protein

Gene

>AfisC8G01453
GTATACCCCCCATTGATTATTCTTCAATTCACTTAATATCCCATAGTACAAAAGTGTGTGCGAATTTCCAAATAGATTTTGCATTCATTTTCGTCAGATCTTGCTTTCCCATAGGTGGGGATTTCTTGTTTTTTCCTCCTATTCTTATTTCTTCTTCACCCCCCCTCTCTCTCTCTCTCCAGATTCCGTTCCTTATAAACAACGAACAAAACATATTATATCGAAAATATCCCAATATTCTCATCTCTTCCAATTCATCCATTCAATCTCCTCAAAGATAATCAGAAGCCATGGCTATAGCTACTGAGACCCAGTTTCATGTTTTAGCGGTCGATGACAGTATCATTGATCGAAAACTCATTGAAAGGCTGCTTAAGACCTCGTCATATCAAGGTTTTTCTTCAATCATGAATATTACTATTTTTTAAAATTTATAAATTTTATTTTATTTTTGGTTGCTTTTGCCTGTTTTGTTAGTCACCACTGTGGATTCTGGAAGCAAAGCTCTGGAATTTCTCGGATTGATGCAGAATATGCATGAAACGTCGCCTTCTTCTTCGACTTTTGAACACAATGTAAGGATTGTTTCACAAATTATGCTTTTTTGTTTTGAAAATTTGCATGATTTTTTATTCGGGTTTTGGTATTTTCAGGAAATTGAAGTCAACATGGTGATTACAGACTACTGTATGCCTGGCATGACTGGATACGATCTGCTAAAAAAGATTAAAGTAACTTTATTTTATTAAGACCGAAAATTTTCATCTTGTTTTACTAAATGTTTGTCACAATGATATAATCAGGAATCACAATCTCTGAAAGATATCCCTGTTGTTATCATGTCATCGGAGAATGTACCTTCAAGGATTAACAGGTGATTACCCATGCTTAAGTACTTGATTTGTTTCCTAATTAGTTTTTATCGACAAATATAGTTTAAAAATATTTCCCTATTTAGTTTTTATCATCAAGTATAGTTTTTTAAATATGATGCCAAGATGATTAAGTACTATAACATGGCTTTAAATCCGTCTGAGTGCACCTTGAACCTAATGGCTATTAACGTTATTCAGTTTGAGATCAAATAACTTTAGGTAAAACTGCAGATTGTTCTTGTGTAAGAGAAACAAATAATTTTGAGATCAAATAAAAGTCAGAATATAAACTACTTATTGGTTACAATGTATCTTGTGTAAGGGAAACAACCATGAATTGCTTGTACCTTGTAAAGTAATTTAATTAATAATGTTTAATATATTTTTATCAAATTAGTTTAAGAAAGCTTTTCTTAATCCTACGTACTGTAATTAAGAAGAATAAAGTAAAAGTAACTGTTTGTGCCAAATTAGTCAAACATCATTCCAAGATCTTTTTTTTCCTTCTTCTTTACATAGATTTTATTCTGACCACTTTTTATGATGGGTCGCTATGGAAAGTTCAGAGAAGAATCAAAATGTTTGCTTTTCTTTTAATATTCTCAGTACTAAATATGGAAAATTTTCTTTTGATCGATTAAAAGTAGATGTCTAGAAGAAGGAGCTGATGAATTTTTACTGAAACCAGTAAAGTTATCAGATGTGAATAGACTAAGGCCTCACATGTTAAAATGCAAGAATAGAGATCATCAGCTACAGGAACAGGGAAACCTAACTTCAAGTCAAACAAACAGTAAAAAGAGAAAATCAACCGATGAGGGGCTTTCACCTGACAGAACTAGGCCTAGATTATCAACTAGCTGCAGTTTGACTTTGCTGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010931988.1	1.1e-63	two-component response regulator ORR9
Swissprot	B8BLZ4.1	6.1e-59	OsRR10
trEMBL	A0A6I9S1W7	7.9e-64	two-component response regulator ORR9

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G57040.1	54.19	1e-62	236	ARR9;ATRR4	response regulator 9

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G01453	AT3G57040.1	227	62	4	1	185	1	227	54.19	1e-62	236
AfisC8G01453	AT2G41310.1	218	69	3	1	184	1	217	52.29	2e-57	218
AfisC8G01453	AT1G59940.1	151	50	2	8	158	32	171	59.60	5e-48	187

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	11	135	76.0	2.2e-21

Gene Ontology

Accession	Ontology	Name
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0005515	F	protein binding
GO:0003677	F	DNA binding
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009793	P	embryo development ending in seed dormancy
GO:0010161	P	red light signaling pathway
GO:0010200	P	response to chitin
GO:0019827	P	stem cell population maintenance
GO:0042752	P	regulation of circadian rhythm
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14492	ARR-A; two-component response regulator ARR-A family	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network