result

Gene information

Detail information of AfisC8G01480

Location

Gene	Chr	Start	End	Strand
AfisC8G01480	chr8	304002047	304004263	-

Sequences

CDS

>AfisC8G01480
ATGGAACTAACCCCTGGTATGTCTGCTCTAGTCACTGGAGGTGCTAATGGAATAGGCAAAGCTATCGGCCTGGCTCTTGCCAAAAATGGTCTCTTTGTAACTGTTGTTGATTTTTCTGAAGAGAGAGGAAATGAAACTGCTTCCTTGTTAGAAAAAGAGAACAAAAAGTTCCATCCTGACATAGATCATCCTTCTGCAATGTTCATCAAATGTGATGTTACTAATACCGGTGAAGTATCTGCTGCATTTGAGAAGCATGTAGAGATATATGGAGGTCTAGACATTTGTGTAAACAGTGCAGGAGTTGGTACTACAGTAAAACGCTTTGATGAAGATGTATCTGATGGCATTAATACATGGAGACGTATCATCAGTATAAACTTTGTTGCTGTTATTGACTGCACTAGAATTGCGATCCAAACAATGCGGAAAACTAAGAAGCCTGGAGTAATTATCAATCTTGGGTCAGCATCCGGTCTTTACCCAATGTGTGTTGATCCAATCTATTCAGCCAGTAAAGGTGGGGTTGTTCTGTTTACTCGATCATGCAGTACATTAAGTCGTGAAGGGATCCGTGTTAATGTCCTTTGTCCTGAGTTTGTCGATACCGGCATAATATCAGAGAACAATTTGGCAGATGTTAAAATGGTTGGTGGATATTTGCCAATGAAGACGGTTGTAGAAGGTGCATTTAAACTTATAAAAGATGAGAGCAAAGCCGGAGCATGTTTATGGATCACTAACCGTAGAGGCACAGAATACTGGCCTACTTCCGAAGAAGAGAACAAAATATGGGGCAATTTAGTGACAAAATGGCAAGGGAAAGTATACACAGAGCTTCCGACAACAAAACCCGATCAAGCATGGTCGCTACTAAAAGACTTTTGCAACCTCCATAAATATCTACCTTCATTGTCTGTCTGTGAAAAAGTAGAGGGTGAGGATGAAATTCCAGGCTGTGTACGGTACTGTGCGGGTACAATGCAACCAAGTGGAGTAAGCTTCTGGGCCAAGGAGAAGTTGATATCATTTGATAATGCAAAGAGAAGCTACAGTTATGAAGTAACAGAGAGTAGCATTGGGGTTGAAGGGTATATTGCAACATTACAAGTAGTCGAGGGAGGTGTTGATAATGATGATGGGTGTAAGATTGAGTGGTCTTTTGAGTTCAAACCTCTAGAAGGTTTCAGCCAGGCGGGTTATATTAAAATTTTGCAACACTGGATCAAGGAGATGGCTAAGAATGTTGAAGATGGTTTAGCAACGAATGGCCATTGA

Protein

Gene

>AfisC8G01480
ATGGAACTAACCCCTGGTATGTCTGCTCTAGTCACTGGAGGTGCTAATGGAATAGGTAACAGTTACTATCATAATAATCCAGTTCATTGTATGTATAGTTTGTTTAAAGTAAGTATATGCTACAAAAATACGCTTAATTTAAAACATACTGCAATACATATACTTGCTTGATATTTACTTCTGTTTCAGGCAAAGCTATCGGCCTGGCTCTTGCCAAAAATGGTCTCTTTGTAACTGTTGTTGATTTTTCTGAAGAGAGAGGAAATGAAACTGCTTCCTTGTTAGAAAAAGAGAACAAAAAGTTCCATCCTGACATAGATCATCCTTCTGCAATGTTCATCAAATGTGATGTTACTAATACCGGTATATAACCATACATGTTACATGTAACTTAATATTGTACTATATTTCAGATTTCACTGTTACATATGACAAGAAACTTTGGATCCATTTTGCGCAGGTGAAGTATCTGCTGCATTTGAGAAGCATGTAGAGATATATGGAGGTCTAGACATTTGTGTAAACAGTGCAGGAGTTGGTACTACAGTAAAACGCTTTGATGAAGATGTATCTGATGGCATTAATACATGGAGACGTATCATCAGTATAAACTTTGTTGCTGTTATTGACTGCACTAGAATTGCGGTAAAAATAATTATTTCAGTCAATACGGATAAAGTTTAGCAACTTAAACAATTTTGCAGAATTTCACGCTAATTTTAGTTACTGTTTTGCAGATCCAAACAATGCGGAAAACTAAGAAGCCTGGAGTAATTATCAATCTTGGGTCAGCATCCGGTCTTTACCCAATGTGTGTTGATCCAATCTATTCAGCCAGTAAAGGTATGAATTAGATGCACTCCTGTTTGTAAGCATTTGGTAATTTGAAGTAATTTTTATTTTCAAAATGATGCGAATAAATGTGTAGAGAGCTCAGAACAGAAACTCTGAAATACATATATGAATGTCATACTTTGGAATAACATATACATAGCAGTCATTGAAATTTATATAATTGTGTACGTAAACAATAGGCGAATATCATTGTAAAGCATGGAATTTAGAACTGATTACATGCGGAAAACGAACTGTTTTTCATTTATTTATTTGCAGGTGGGGTTGTTCTGTTTACTCGATCATGCAGTACATTAAGTCGTGAAGGGATCCGTGTTAATGTCCTTTGTCCTGAGGTATTGATAAAATTTATGATTTTTTTTCTTCTTTTCAGAGCTAATTAAATAACCATATGCTTTATAAATACATATGTACGTACTTGACACAATATGCTGATTTCATGCAGTTTGTCGATACCGGCATAATATCAGAGAACAATTTGGCAGATGTTAAAATGGTTGGTGGATATTTGCCAATGAAGACGGTTGTAGAAGGTATAAATCACAGCTAAATTAATAATCTAACGACAAGAAGATAATATAAACCAAAAGGACAAATATTTTGTTTATCTATGGCTTTCCTTAATACCTAACATGCTACATCTATATATCTCAGGTGCATTTAAACTTATAAAAGATGAGAGCAAAGCCGGAGCATGTTTATGGATCACTAACCGTAGAGGCACAGAATACTGGCCTACTTCCGAAGAAGAGAACAAAATATGGGGCAATTTAGTGACAAAATGGCAAGGGAAAGTATACACAGAGCTTCCGACAACAAAACCCGATCAAGCATGGTCGCTACTAAAAGACTTTTGCAACCTCCATAAATATCTACCTTCATTGTCTGTCTGTGAAAAAGTAGAGGGTGAGGATGAAATTCCAGGCTGTGTACGGTACTGTGCGGGTACAATGCAACCAAGTGGAGTAAGCTTCTGGGCCAAGGAGAAGTTGATATCATTTGATAATGCAAAGAGAAGCTACAGTTATGAAGTAACAGAGAGTAGCATTGGGGTTGAAGGGTATATTGCAACATTACAAGTAGTCGAGGGAGGTGTTGATAATGATGATGGGTGTAAGATTGAGTGGTCTTTTGAGTTCAAACCTCTAGAAGGTTTCAGCCAGGCGGGTTATATTAAAATTTTGCAACACTGGATCAAGGAGATGGCTAAGAATGTTGAAGATGGTTTAGCAACGAATGGCCATTGATGGTTTGCTAGATGTGTCGCGTTTGTCTTTAAATTTATGTTTTATGCATTTGAAAATAATGTGCCCTCTGCTTGTAATGGAAGGAGTGTTGCTTTACACATTATGAATAATAAAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK67273.1	7.7e-102	uncharacterized protein A4U43_C06F18430
Swissprot	P59082.1	3.5e-43	Lachrymatory-factor synthase
trEMBL	A0A5P1ENN6	5.5e-102	Enoyl reductase (ER) domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G49670.1	57.79	1e-92	337	NQR	ARP protein (REF)

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G01480	AT1G49670.2	263	110	1	1	263	1	262	57.79	1e-92	337
AfisC8G01480	AT1G49670.1	263	110	1	1	263	1	262	57.79	1e-92	337
AfisC8G01480	AT2G25770.2	152	86	3	271	418	9	157	38.82	9e-28	121

Ortholog group

Species	Genes
Allium cepa	g364478.t1; g468157.t1
Allium fistulosum	AfisC8G01480
Allium sativum	Asa1G03601.1; Asa1G03607.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00106.22	adh_short	Domain	9	209	144.7	2e-42
PF10604.6	Polyketide_cyc2	Family	283	411	69.9	2.3e-19

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006690	P	icosanoid metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007186	P	G-protein coupled receptor signaling pathway
GO:0009058	P	biosynthetic process
GO:0016043	P	cellular component organization
GO:0016616	F	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0033559	P	unsaturated fatty acid metabolic process
GO:0042180	P	cellular ketone metabolic process
GO:0043168	F	anion binding
GO:0044421	C	extracellular region part
GO:0044425	C	membrane part
GO:0044444	C	cytoplasmic part
GO:0044446	C	intracellular organelle part
GO:0044703	P	multi-organism reproductive process
GO:0044706	P	multi-multicellular organism process
GO:0051287	F	NAD binding
GO:0070013	C	intracellular organelle lumen
GO:1901360	P	organic cyclic compound metabolic process
GO:1902652	P	secondary alcohol metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00069	HPGD; 15-hydroxyprostaglandin dehydrogenase (NAD)	EC:1.1.1.141	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network