result

Gene information

Detail information of AfisC8G01759

Location

Gene	Chr	Start	End	Strand
AfisC8G01759	chr8	358411896	358414345	-

Sequences

CDS

Protein

Gene

>AfisC8G01759
ATGATATTTGAATTGGAGCTACTTCTATCATTGGTAAGTTTCCATTCCATTTCATCTACGAAATTTGTTTGAGATTTTTCCGCTTAATCTCATATTTAATTCATGAGATGATTCAAATATAAACGGATTATAATACCTATTAAAATCTTATATTAAATGAAAAATAAATTAAAATAAGTTTTCAAAATGAATCAAAGATTTTTATTTATCTCGCATGCTCAACTTCCTTTTCCTAACTGCTATTTATACTAATAGAAGCATGTTCAGTTGAGAACTATAGTCATTTCTTCTAACATCTATGGTTGTAAAACTTATTGTATTCACTAAATGCTAAATTTTATGGTTTCTCCATTTAATATGGATTTGCTTTATAAACCAACACAACAACAAAATAAGAAACTTCTAATAAACATAGAAACCAAATAAAATTTGTATTACCTGATCAGACAGTTAGTGGAAAGATAAACAACCAAGTAACACCATCATCCACATTGAGCCTTGGTATTGAAGTGCCAAAATACTCAATCAAGTGCCATATATGTAGAAACTGATTTTCCAAAATCACGTTTAAAAGCTTAAGAGTTTGCACCAAAAAAACTAAATCAATGAGGCGATAAACTATTAAAAAAGCTTAGGAACCACAATAACCAAAGCCATTGATAAATAGATCAACTAGACAGAGATTACATGTAAATTTGAAATTTAATCAGTATTTAAAATTACACACACATAAATACTCTATTTAATCAGTATTTGAAATGAACTAAGACGGAGATTTACACAAATTTATATTACAAGGAACATATAAACACTCTAGATATATTTTGATTGTACTACAGTCAACAAACTTCTCAAAGATGTAAAACTTGTTGATTATTGCATAAATTTAGTTAATTTTCATAAAACTTGGTTAACTTGATTAACATTTTATAATTTATTATTATTATTATTATTATTATTATTATTATTATTATAAATTAAGTTATTTTTTATAAAACTTAGTTAACTTGGTTATTAATTTTATTATTATTAAGTTAGTTAATCATCATCATCATCATTATTATTATAAACATGTTGATTTTTGTAAAACTTAGTTAACTCACTTGAATTTTTATAATACTTAGTTAAATTTTATAAATTTATTTAATCTTTATAAATCATATTTAATTTTTATAAAATTTAGTTAACTTAGTTAATTTATTATTATGATTGTTATTATTATTTAACTTAGTCAAATATAAGACATTTGAAACTAAACTGTATATTATATTAGAAAAATGAACTATTAAGTTACTGAACAAAAACCATACACCTATATGGCTAGGAGTAAGTATAGTTACCTCCCCTAGTCCCATATCGATCAGCTAATGTGAACTCTATTACCCATGAATAATAAAAATAGAGAAAACGCTGAAACCATTTCAACATATTGATTAGGAAAACACAATCTGCATCATTTCAGCACAACATGAATAAAAGTATTGATTAGGAGAACACGACATGAATAATAAAAAATGAACTCTCTTATCCATGAATAAAAATTAAGAAAATGTTTAGAAATAAAACCTCTGTTACCCATGATAGTTTTATAAAATTTCAGTTTCGACATAATTTCAACATCACCCTCCTCTACAAGTTCACCCGGCCACCCCCATCATCTACAAACTACCACCAACATACTTTTCATAAAACGTTGTTATCTAGCGCTGCAAAAATAGCATAAGCAAAAAATACAAGTGATTAAAAGAGAAAGATGCATTTAGGCCATCTCACGTGATTATGCATGTACAAGTGTAAAAGAAATAAGTTTCAGTCGTGGAATTATTTATCTTTTGTTTATAAATATTCATTGACTAACTGTCACATAAAATCAAGAAAATCAGATAAGATTCCATGTTGAAGTCTTAAATGCTTGGTTGCTTACCAATGGCATGATCAGTTGTAGATTGCTGCATTGCATGTAGCTTGATAACTTCAATCCTGAAGTTTCAGATTTTGGGCTTGCAAAACTTTGTGCAAGAGATCAGAGTATTGTTACAATGACTGCTGCAAGGGGCACATTGGGCTATATTGCACCTGAGATTCTTTCAAGAAACTTTCGAAATGCGTCCTATAAATCTGATATTTATAGTTTTGGAATGTTGCTTTTTGAAATTGTAAGTGGTAAAAGAACAACTGAACCAATAATTGAGAATCAGGATGAGGTTTGTTTTCCAAAATGGATATATAACAAGTTAACTGATGGTGCGGATACTGGTTTGGATATAAAAAATGAAAAAGATCAAGATATAATTAGAAAACTAGTTATTGTAGCATTACGGTGCATTCAGCTGAACCCAAATGATCGCCCTACTATGACGAGAGTACTTCAGATTTTGTCTGGAAATCTGGAAAGTTTGCAGGTTCCACCCAAGCCTTTTTTCTCACCTTATCAAGATATAGGTAGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263725.1	5.4e-62	rust resistance kinase Lr10-like
Swissprot	P93604.1	3.7e-52	Probable receptor-like serine/threonine-protein kinase LRK10
trEMBL	F2DWT2	2.3e-51	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G38280.1	46.63	1e-39	159	PR5K	PR5-like receptor kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G01759	AT5G38280.1	163	82	3	13	170	465	627	46.63	1e-39	159
AfisC8G01759	AT1G70250.1	153	78	2	17	164	597	749	45.75	2e-38	155
AfisC8G01759	AT5G39020.1	152	82	1	13	162	629	780	44.74	3e-38	154

Ortholog group

Species	Genes
Allium cepa	g280173.t1
Allium fistulosum	AfisC8G01759
Allium sativum	Asa5G00658.1; Asa5G00670.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	15	147	59.4	3.1e-16

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0002229	P	defense response to oomycetes
GO:0005576	C	extracellular region
GO:0004674	F	protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0006071	P	glycerol metabolic process
GO:0006968	P	cellular defense response
GO:0008889	F	glycerophosphodiester phosphodiesterase activity
GO:0009506	C	plasmodesma
GO:0009617	P	response to bacterium
GO:0031625	F	ubiquitin protein ligase binding
GO:0045087	P	innate immune response
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network