result

Gene information

Detail information of AfisC8G02084

Location

Gene	Chr	Start	End	Strand
AfisC8G02084	chr8	411414046	411417455	+

Sequences

CDS

>AfisC8G02084
ATGCAGGTATTCCCCTTGTTGTTTGAAGCTTACACAACGTTACCATTGGTGTCACAAATATCGTATGTATCAAGAGACAAGCATATGCTATCATATTATATGGATGGAAATCAAACGTATGCCTTATTTTCTAATTCTTCGAATTCATTTGTCAGTCAAAAAGTTAACAATACAAACGGTGAGAGTTATGGAGAAGAAATAGCATTGCCTGAACTTCAGACAAATGCATCTAAATGGTTCGATGATGCTTTAAATGGAACAAGTGGATATACTTATTGGGGAATAAGCTATGGAAGAGAGAAACAACAAATGTTGTATTTTACAGCTTCAACACCTGATCATAACGCAGTTATATCACTTGGTCTTCTAATGGAAAATTACAGGAACCATGTACTATCCAGTAACACATATAATTATGGTACTAGAATGTACTTATCTTCAAATGATGGTAACATACATGAACATAGTGGTGCTGTTCTCCATAGTTTCCAGTCGACCCCGGAACAAACCAACTCTGTTTGCCATGCAAAGATCAAGAATTTGAGAAGGACGCAGCTTTTTGATTGTTCTTCTTTCGATATAGGAGGAATAAAAATGGTGGTTGCTGCAATAACCTACGTAAAAGAAGTTATCAACATTGAATATGTTCAAGCGCTAAATATAGGCATTATTACACTGTTGTGCATTCTAATTCTTGGCTTGGTTACTGAAAGTTACATAATGCTACTGACGAATAGAAAGTCAATGAAAAAGGAGACATGCTTGAAGGCCAACTTGATAAAACTAAAGGAAGCTGTACAACAAGCAGAGAGGAAGAGTATGAACAAGAGCTTGGCATTTGCTAGTGCTAGTCACGATGTACGTAACTCACTTTCTGGTATTACTGGGCTCATTGAGCTATGTCGTAAAGAAGTTCAATCGAGTTATGCATCAATGCAATTGAAGGAGAACTTAGTGCAAATGCAGGCTTGTGCATCTGACCTTTTAAGGATAGTAAACTCCGTGTTGGACATGAGTAAAGTTGAAGCTGGTAAAATGCAATTAGAAGAGGCAGAGTTTGATATAGGTCAAGCTATCGAAGAATCTGTTGATTTTTGCAATATTGCTGCTTTGAATAAAGGGTTGGAGGTCATATGGGATCCTTGTGACTTCTCCATTTTGAATGGAGGAGCTTCTAGAGTCAAAGGAGATTGTATAAGATTCAAACAAATTCTTGATAATTTACTTGGCAATGCAAGGAAGTTCACACAAAGTGGTCATATAGTGTTGCGTGGATGGGCCTCAAAGCAAAATGAATACGATATTAGTCACGAGTTGATCGAATTTGTGTTCGAGGTTGATGACACGGGTATTGGGATTCCAAAGGAGAAGAGAGAATCCATATTTGAAAATTATGTTCAGGTTAAAGAATCCGCTTTTCAAGGCCAAGAAGGCACTGGTTTAGGACTTGGCATTGTGCAATCACTTGTGCGTTTGATGGGAGGAGAAATTGGAGTAATAGATAAAGTGCGTGGCGAGAAAGGAGCTTGCTTCAGATTTAATATCATTCTAAAAGCAGCCGATACTAATATTTTTGAATCAACGAAGGGTCTGAAAGAATTCACAGAGACGGTGAAAGCAAGAGGAGGTACCACGAAGTCGACATTATTAGTTTCAGGGGATGAAACAAGAAGAATTTTGAAACATTTCATGGAAAACATAGGCGTTGAAGCTAACATAGTTGAAAGCTGGGAGCAGGTTGATCCCACAGTCGTGAAAAGCAGACGTGTTATCAGTAAAAGATTTAGAAGTAGCGGATCTTCAAACAGGATAACAGCATCAGACACCAAAACTGAAGACCGAACTCCTCAAGTCAACTCGAATGATATTTTGTGTAGTAAAAGATTTAAAGATTCATCATCCCCCGTTTTCATTTTGATTCTCATCGATATCAATTGCTGTGGAGATTTCTCTAATATGTACTCAATCTTAGACAAATTTTCAAAGTTTCAATTTGAGAATAACAACAAACTATCGCAATTTAAGATTGTTTGTCTAGTGAATCCAAATACACATAGTTCAGAAATCATTAGGATAAAAGAAACTTTTTGTTATTCATTAAGGAAACCTATTCATGGTTCAAGGTTGCATGATATTATAAGAATGATCCAAGAATTTGGAGAAAATGAAGAAGATAAAGTTTCTTATATACCTAGTGAACCACAATCAAAACTGGAAAGCAGTGATGTAGAAGTGAATATTGAAGAACAAAAGCAACTTAATGGGATGAGAATTCTACTAGTAGAAGACGTAATGGTGATGAGAGTTATTGCTGTTAGGGTACTGTCAAAACTTGGGGCAGTAGTAGACGTTGCAGAAAATGGTTTGAAGGCTCTAAATATGATTAAGATTGCACTGCAAGACTCATTTTGCCATTGTACTGAAATAGGCAAGAACAAACCTTTGCCTTATGATGTTATTCTTATGGACTGTGAGATGCCAGTAATGAATGGATTTGAAGCAACCAAAAGAATTCGTGAAGAGGAAAAGAAATATGGGATTCATATTCCTATTTTTGCTCTTTCTGGACATATAGAACAAGATCAAATCAACAAGGCTACTTCAGCAGGAATGAACCTTCATTTGGCAAAGCCAATTAAAGAAGAAAATATACTTGAAGCTATCAGACAAGTTATGCAATATTGA

Protein

Gene

>AfisC8G02084
ATGCAGGTATTCCCCTTGTTGTTTGAAGCTTACACAACGTTACCATTGGTGTCACAAATATCGTATGTATCAAGAGACAAGCATATGCTATCATATTATATGGATGGAAATCAAACGTATGCCTTATTTTCTAATTCTTCGAATTCATTTGTCAGTCAAAAAGTTAACAATACAAACGGTGAGAGTTATGGAGAAGAAATAGCATTGCCTGAACTTCAGACAAATGCATCTAAATGGTTCGATGATGCTTTAAATGGAACAAGTGGATATACTTATTGGGGAATAAGCTATGGAAGAGAGAAACAACAAATGTTGTATTTTACAGCTTCAACACCTGATCATAACGCAGTTATATCACTTGGTCTTCTAATGGAAAATTACAGGAACCATGTACTATCCAGTAACACATATAATTATGGTACTAGAATGTACTTATCTTCAAATGATGGTAACATACATGAACATAGTGGTGCTGTTCTCCATAGTTTCCAGTCGACCCCGGAACAAACCAACTCTGTTTGCCATGCAAAGATCAAGAATTTGAGAAGGACGCAGCTTTTTGATTGTTCTTCTTTCGATATAGGAGGAATAAAAATGGTATGAATTTGTTAATAAAATGGTTTTCTTTTAGTATGCCACCATATGATTACTAACAATGCTAAAACTGAATAGGTGGTTGCTGCAATAACCTACGTAAAAGAAGTTATCAACATTGAATATGTTCAAGCGCTAAATATAGGCATTATTACACTGTTGTGCATTCTAATTCTTGGCTTGGTTACTGAAAGTTACATAATGCTACTGACGAATAGAAAGTCAATGAAAAAGGAGACATGCTTGAAGGCCAACTTGATAAAACTAAAGGAAGCTGTACAACAAGCAGAGAGGAAGAGTATGAACAAGAGCTTGGCATTTGCTAGTGCTAGTCACGATGTACGTAACTCACTTTCTGGTATTACTGGGCTCATTGAGCTATGTCGTAAAGAAGTTCAATCGAGTTATGCATCAATGCAATTGAAGGAGAACTTAGTGCAAATGCAGGCTTGTGCATCTGACCTTTTAAGGATAGTAAACTCCGTGTTGGACATGAGTAAAGTTGAAGCTGGTAAAATGCAATTAGAAGAGGCAGAGTTTGATATAGGTCAAGCTATCGAAGAATCTGTTGATTTTTGCAATATTGCTGCTTTGAATAAAGGGTTGGAGGTCATATGGGATCCTTGTGACTTCTCCATTTTGAATGGAGGAGCTTCTAGAGTCAAAGGAGATTGTATAAGATTCAAACAAATTCTTGATAATTTACTTGGCAATGCAAGGAAGTTCACACAAAGTGGTCATATAGTGTTGCGTGGATGGGCCTCAAAGCAAAATGAATACGATATTAGTCACGAGTTGATCGAATTTGTGTTCGAGGTTGATGACACGGGTATTGGGATTCCAAAGGAGAAGAGAGAATCCATATTTGAAAATTATGTTCAGGTTAAAGAATCCGCTTTTCAAGGCCAAGAAGGCACTGGTTTAGGACTTGGCATTGTGCAATCACTTGTAAGTACTAGTCTTCTCTTTACTTTCAATTTAATATCCAAGTAAGCTAGAGCTATCCATAAACTTATAAGCCTTGTAAGACTGGAAAAATATTCGTCGACTCCAACTCATTCTTTAGGGCATGCTTGGTAAATGTTTATAATTAGTCTAAGCTACTTATAAGTAGCTTATTTGAGTTTGGATGTTTGAAAACTGATTATTATGAGGTAGCATAAGTAGTTTAGAAGCTAAATTCCATAAAACAACTTTTGGTTGATTATAACTTATTGCAGAATTTTCATAAGTTATTTTGATCAAATAATAATTAAAATAACCTTATTATTCAAACAATCTAGAAGCAAGATTCCACTATTTGTTATTCAGCCGTTTTACATGGATGTTTAAATAAGTAGTAGTCAAGACCTTTTAGACTTTTCTTTATAAAAAGAATTAAGCTATCATCAAGGTTGATATCTCATTGCTTTGGCCAGAAAGCTAATATTCTTGAAAATATATTATTATGTATGCTAATTTCATATGTAATATGTAAAGGTGCGTTTGATGGGAGGAGAAATTGGAGTAATAGATAAAGTGCGTGGCGAGAAAGGAGCTTGCTTCAGATTTAATATCATTCTAAAAGCAGCCGATACTAATATTTTTGAATCAACGAAGGGTCTGAAAGAATTCACAGAGACGGTGAAAGCAAGAGGAGGTACCACGAAGTCGACATTATTAGTTTCAGGGGATGAAACAAGAAGAATTTTGAAACATTTCATGGAAAACATAGGCGTTGAAGCTAACATAGTTGAAAGCTGGGAGCAGGTTGATCCCACAGTCGTGAAAAGCAGACGTGTTATCAGTAAAAGATTTAGAAGTAGCGGATCTTCAAACAGGATAACAGCATCAGACACCAAAACTGAAGACCGAACTCCTCAAGTCAACTCGAATGATATTTTGTGTAGTAAAAGATTTAAAGATTCATCATCCCCCGTTTTCATTTTGATTCTCATCGATATCAATTGCTGTGGAGATTTCTCTAATATGTACTCAATCTTAGACAAATTTTCAAAGTTTCAATTTGAGAATAACAACAAACTATCGCAATTTAAGATTGTTTGTCTAGTGAATCCAAATACACATAGTTCAGAAATCATTAGGATAAAAGAAACTTTTTGTTATTCATTAAGGAAACCTATTCATGGTTCAAGGTTGCATGATATTATAAGAATGATCCAAGAATTTGGAGAAAATGAAGAAGATAAAGTTTCTTATATACCTAGTGAACCACAATCAAAACTGGAAAGCAGTGATGTAGAAGTGAATATTGAAGAACAAAAGCAACTTAATGGGATGAGAATTCTACTAGTAGAAGACGTAATGGTGATGAGAGTTATTGCTGTTAGGGTACTGTCAAAACTTGGGGCAGTAGTAGACGTTGCAGAAAATGGTTTGAAGGCTCTAAATATGATTAAGATTGCACTGCAAGACTCATTTTGCCATTGTACTGAAATAGGCAAGAACAAACCTTTGCCTTATGATGTTATTCTTATGGACTGTGAGGTAATGAAACAACTACAGCAGCGTCTTTGTCTTTTTCTCTTCTTCCTTTTTCCCTTCTTCTGTGTGTGTGTGTTTATTTATAAGGTTTTGATTTTGTTTTATGTTCTTGTTTTGATCAGATGCCAGTAATGAATGGATTTGAAGCAACCAAAAGAATTCGTGAAGAGGAAAAGAAATATGGGATTCATATTCCTATTTTTGCTCTTTCTGGACATATAGAACAAGATCAAATCAACAAGGCTACTTCAGCAGGAATGAACCTTCATTTGGCAAAGCCAATTAAAGAAGAAAATATACTTGAAGCTATCAGACAAGTTATGCAATATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269943.1	1.5e-195	probable histidine kinase 2
Swissprot	A2YA15.1	2.6e-120	Probable histidine kinase 2
trEMBL	A0A5P1EIY3	1.1e-195	Histidine kinase CKI1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G47430.1	31.00	8e-116	415	CKI1	Signal transduction histidine kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G02084	AT2G47430.1	1055	526	33	2	891	100	1117	31.00	8e-116	415
AfisC8G02084	AT2G17820.1	789	398	24	217	888	445	1192	29.53	1e-67	255
AfisC8G02084	AT2G01830.2	696	367	22	261	888	458	1067	25.14	9e-42	169

Ortholog group

Species	Genes
Allium cepa	g430525.t1; g430526.t1; g430527.t1; g430535.t1; g430539.t1; g430540.t1; g430541.t1; g430545.t1
Allium fistulosum	AfisC8G02084
Allium sativum	Asa1G03119.1
Arabidopsis thaliana	AT2G47430.1
Oryza sativa	LOC_Os06g08450.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00512.22	HisKA	Domain	277	344	42.5	4.4e-11
PF02518.23	HATPase_c	Domain	396	515	79.0	3.2e-22
PF00072.21	Response_reg	Domain	758	889	71.2	6.9e-20

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003006	P	developmental process involved in reproduction
GO:0016020	C	membrane
GO:0004673	F	protein histidine kinase activity
GO:0004871	F	signal transducer activity
GO:0007165	P	signal transduction
GO:0006468	P	protein phosphorylation
GO:0006725	P	cellular aromatic compound metabolic process
GO:0007275	P	multicellular organism development
GO:0009628	P	response to abiotic stimulus
GO:0030435	P	sporulation resulting in formation of a cellular spore
GO:0034641	P	cellular nitrogen compound metabolic process
GO:0036170	P	filamentous growth of a population of unicellular organisms in response to starvation
GO:0036180	P	filamentous growth of a population of unicellular organisms in response to biotic stimulus
GO:0044424	C	intracellular part
GO:0044702	P	single organism reproductive process
GO:0044710	P	single-organism metabolic process
GO:0046483	P	heterocycle metabolic process
GO:0048315	P	conidium formation
GO:0048584	P	positive regulation of response to stimulus
GO:0050793	P	regulation of developmental process
GO:0051704	P	multi-organism process
GO:0071396	P	cellular response to lipid
GO:0097306	P	cellular response to alcohol
GO:1900430	P	positive regulation of filamentous growth of a population of unicellular organisms
GO:1901360	P	organic cyclic compound metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network