result

Gene information

Detail information of AfisC8G02159


Location
GeneChrStartEndStrand
AfisC8G02159chr8429281476429328437+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020255716.10.0e+00LOW QUALITY PROTEIN: calmodulin-binding transcription activator 3-like
SwissprotQ8GSA7.17.5e-201Signal-responsive protein 1
trEMBLA0A8N4F1E00.0e+00calmodulin-binding transcription activator 3 isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G22300.146.640.0 854CAMTA3;SR1signal responsive 1

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Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03859.13CG-1Domain21135168.24.5e-50
PF01833.21TIGDomain44653131.51.3e-07
PF12796.4Ank_2Repeat65474329.48.5e-07
PF00612.24IQMotif86087915.90.0073
PF00612.24IQMotif88490320.40.00025

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003729FmRNA binding
GO:0042742Pdefense response to bacterium
GO:0050832Pdefense response to fungus
GO:0005773Cvacuole
GO:0005516Fcalmodulin binding
GO:0008134Ftranscription factor binding
GO:0009409Presponse to cold
GO:0009506Cplasmodesma
GO:0010150Pleaf senescence
GO:0014898Pcardiac muscle hypertrophy in response to stress
GO:0016607Cnuclear speck
GO:0035061Cinterchromatin granule
GO:0042826Fhistone deacetylase binding
GO:0043565Fsequence-specific DNA binding
GO:0045944Ppositive regulation of transcription from RNA polymerase II promoter
GO:0050885Pneuromuscular process controlling balance
GO:0071275Pcellular response to aluminum ion

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K21596CAMTA; calmodulin-binding transcription activatorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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