Detail information of AfisC8G02353


Location
GeneChrStartEndStrand
AfisC8G02353chr8471377788471381223+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020253742.16.2e-47transcription factor bHLH30-like
SwissprotQ9S7Y1.14.5e-42bHLH transcription factor bHLH030
trEMBLA0A6J0PFA65.9e-47transcription factor bHLH30

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G68810.161.671e-49 192basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag140534.t1
Allium fistulosumAfisC8G02353
Allium sativumAsa1G02882.1
Arabidopsis thalianaAT1G68810.1
Oryza sativaLOC_Os03g15440.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00010.23HLHDomain509642.15.6e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005739Cmitochondrion
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009718Panthocyanin-containing compound biosynthetic process
GO:0009941Cchloroplast envelope
GO:0010200Presponse to chitin
GO:0016036Pcellular response to phosphate starvation
GO:0042538Phyperosmotic salinity response
GO:0080147Proot hair cell development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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