result

Gene information

Detail information of AfisC8G02508

Location

Gene	Chr	Start	End	Strand
AfisC8G02508	chr8	496608693	496613140	+

Sequences

CDS

Protein

Gene

>AfisC8G02508
ACTCTATCTGTTACTTGTGGTTGTTAGTTGTTGCTTTCATTTACTGGTTTTCTCCTTTTCTTGTTTTTTTCCTAGCCCAAAATAAAAAATTCGCGCACGCCGTGAACTTCCTGTTAATCGTGTCCAAAGGGCCCTAGATGCATACATCACTCAAATAACGAAAAGGCGAAAGAGGGGCGAGAGAAGATGTGGTGCCATTCATGTAGGGAGGAATACGTAGAAGTAGACGCAGGAACCTGCAAAGAATGCTACGAAGAAGCAAGCGAAACCGAAGAAGAACTCAAGCGTGAAATCGAAGATCTCAAATCCAAAGTTTCTTTCCTCCGCCTCAATTCCCCATTAGATTCCCATCTTTCCTCGTCCTCTTCCGCCGCTACTGATGTTTTCCTTCACGCCGCCGTTGACTCTGACGGATCCTCCTCCGTCCCTGCTGTTCCAGCTCATCGCGCTGTTTTGGTACTTTTTAATCATCTTTTATGTATTCCAATTTTTTCTGTTATATTTTGTGTTTGGGATGATCGACTGGTCGACTGGGACGTGCTGGTCTTTGATCGTTGTGACAGGCTATATTTGTTTTTGTTAAGAAGTTCTTAATAGAACTTCTGATTTGTAAATCAGAAAATTCTTTTTGTTATTTGTTTTTTAATTGGACTGCAGCCAAAAGTATTTAGAACTTTTTTCTTGTTTATTTTTAGATCCGAAGGCCGAATGATAATTTGTCCACTTTATAACCTTCTTAAAACCTACAAATATAATGCGAATTCGAAATTTTTATAACATTTGAAATCTCAAATTTTCAAAATCCAATGTACTTTTAAAATATACAATTTTGAACATTCCAGATTTTTAGGTTCAAATTTTTGTGATTGATTTTTTTGAAGACTATTTGTTTTAATTAGAAATTTCAGAAGTTCTAAAATTAGAAGTCTTGAAATTCATTGTTTTAGATTATAATTTCAAACATAAAAAAGTCTGTAGTTAATTTTGAGAATTTAATCTTTCAAAATTAACCTTTTTCACAATTTTTTCTAGTACTCAAATTTCTCCAATTCAAAACTTTTGTTAATATAAAGCACTTAAATTTTACAATTTAAAATCTCAAATTCATACTTTTAATAATTTTTATTTAAAAACCAATGGATATAAAAGGAATTATTGTCAGAAGAAACGTAATTATTAACTGTAATAAAAAATTTCAGAATGCAAACAAGCAAAAGTAAGTAATTACTCAGAATTCAGCAATCGACATTCAAAATTCAGCAATCGGCATTCAGAATTCGAAATTTTAAACAAATGGAGCCGGGTAATTTGAGAGTTAGGGTTTTTGAAATTTAATGGCGTTTTGCATATGAAACGAGTATCAATAGTTGAACAGATAATTAGAAATTTTGTTCGTATGTTCCCTCCCAATTTTACCTAATTTTAGGTCCATTCATTAGGCCCATATACACTAATAGTCCAATTGGATTCAGTTGTGACCATAAAAAGTCCAATGGTAGTAAATTATATCAACTGAACTCACTGAGACAATTCTCATGGTCCTGATGTCTCACTGTTCTTGTTGACATTATATAATTCTAATCACTCTTTTTGTTGCATGCACAAATGTAAGGAGTTGAAAAATCAGACACTACCATACATTGTATTTGAATAAAATAAACATTCACTAGCATGGGATTGGATCCCTTACAACAAAAGTATCCCTGCTCTTCTACAGAAAGGGGCATACAGCATGTTGTAAGCCTCTCTGAATCTTTATAGGATTACCATACCTTTCGTCATAGGGGATCCGAGTTCATTTTAATTGTCTGATTTGTTCCTACCCAATTTCCTCGTTCAATGCTACTAGTACACCTGAATTATCAGCTCAAAATCTGCTTAGGCAGTGAGAGGGTTTGTTAAATTTTTGAGCAGCGAAATCGTATTTCGTGTTTTTTGATTTGCTACGGATATCCGATCAGAAGCCTAGGAATACTTGCTTATGAGACCTTTGATTGTTTAGCTTTGCTGAATAGCAGATTCTTATGATGAATTATGACCTAACAAGATATAAGATGGATAAGTAATATTTTGTTTGGAGGAAAGTTTTGTATAATTAAGTGATAGGTCTAATATGCATTGAGGAGGCTTTGCATTGTAAACTCTGGGTAAATATGCACCGTGTACTACGGGTAAATCATACGAATAGGTAATTGCTAATTAGTGTAGATCAAACCCTCGACATCGCTGATGGTAGCTGACAGTTTCAACCAATCGCACACCACCCATGCAGCAATGTGTCATGTTGCTGTTTCACTGAACCTCACCTTACACTAAAAGTAGCAGTAGATCGAAATTGTGGATGTTCAACGTCGTGGAAGTAGAAACTAAGATGGACTTGTTTTGAGCTTCAGTTTCAACACCAAAACATGATATTAACTTGCAACTGGACTATGCAGTAGTGGTTGTTTACTTGTTTAGTTAATTCACCGGATTCAGATCATAGCTTCTATGTTCCGTTGAAACTCCAATTCGTTATACATTATACAATTAGAAGAGAGTTCACATTTAAAGTATATTGACGATAATAATACTGACATATATCATTGAATATATAAACTATGAATGTGTATGTTAATTAAAAAGTTGAAAAAGAAGAAAATATAGTTCATGGTTTACATACTGAATAGAGATTTTATATCTTACGAATGTAATATAAATTAGTTTTTATTGACGGATGATTAGAATCATATATTGATGATGATAATAACAATGTCTCAGATATCTATTAATCCTTTGTTTTACAAACCCAAATCTATATTTACTAGTTAATAATAATCTGCTGGGTGAAATGACCAAGTTTTAAACTATAAATGAACTCATTTCAAGGACAATTTGATCTTGTATCCATTGATAGGTCTACCTGCAGCCTGATATGGTTTCTTGGAAGTTAAAATATTTGTGAATATTTTTGTCCAGGGCACATAATTAACTACTGCTGGCCCTGATATGTTCTTGTTTTTTCGTAACTGAACTATTTCACCTATTTGCTGATTAATAACGTCTATCACGTCTAAAATAGATAGGAGCCTTATAAATCATACACTCTTTATAGCTGAATTTTTATTTATTTTAAACTCATCAGAAATCTATAAACTGCAAATGCTTTTGATTCAGAAAAGCAGATCGCCAGTTTTCAAAGCAATGTTCGAGAGTGAAATGGAAGAGAGTAAAAGTGGCACTATAAAAATATTTGATGTCTCATACAATGTTCTTAGGTCATTTGTTCACTACTTGTACACAGCAGAAGTACTTTTAGATGAACAGATGGCTTGCAACCTCTTAGTCTTGGCCGAAAAGTACCAAGTGAAACATCTCAAAGATTTTTGTGAAAATTTCATGACATCAAAAGTAAACAATGATAACGCGATTTCAAGTTACGCATTTTCTCATAAGCACAATGCAAAACAACTGCTTGATGCTTCTTTGTCATTGATCATGGACAATATGGTAACATTAAGTGAAAGAGAAGAGTACAAGGAGCTTGTAGAAACTGATCCCAGATTGGTTGTAGAGATATATGAAGCTTATCTTAGTAGGCAGGTCAATACCGCAGCAAAAGACTACCACAGTCCAAGGTTAGTATTATGTCTATTTGAAACAAGTTTATAATGTTAACTATTTCTCAACTCAGTACTCCTTTTATGGTATTTGCTTTGAAGATGCCTTAGAGTATATTTGGCAACTAAAAGAGAGAATGTTTTCCTTTTATTAGAAAAGTCTTAAGAAGGTAATAAGTTGAAAGATTGTTTTATTAAAATATTTTCTTTAAAACAGAGCCGAAAATTATTACAAATTGTTTAATTTTTCATATCAAATTGGTTATTTAATTATTACTTTTTCCCTTTTAGAAATAAAAAAGTTGCTTTTCTAAATTCTTACGACTTATTTGGTTCTTATCTAATAATTTCTTTCTTTTTTCTTTTAAATCTTTGAGATGTAGGCGAGAGGGCAATGGGAGTTCATGTAGCTAGGGAATGTATGGACAGACAACATTTGATGCTGGCATCAGAAAGACAGTGGAAATCAAAAAATAATCTCTGTAAATGCCAGAATTAGTCGGTAATAGTAAGAAGATGGTAATGGGAAATTTTAGTTATGTTTCTTGTTCGTCTTTGTGAAAAATAGTGAAAGTTTGGTGATGTGCACCCCTGAAGTTGGTCAAATGGAAAGCGTGTGTAAGTAATGTGATTGTTTGTTGGTTGATTGATCCTTTTCTTTTGTTTTAAAGATAGATGTGATCTTTCAAATTAGCACTACTCTCAGGAGAAAAATTGAACTTGTCTAAGTTGAGGATCATAGCATCATATATTTAGTGGTGTGATATTTTCATTTTTGCACTTCAACAAATTGAAAAGACGCATTATTTTCAGGACAGTTACATCTTTTAGTCTTAAATTTTTATTCCT

Functional annotation

Database	accession number	e-value	annotation
nr	PKA51740.1	6.0e-94	BTB/POZ domain-containing protein
Swissprot	Q6DBN1.1	5.1e-82	BTB/POZ domain-containing protein At4g08455
trEMBL	A0A2I0A855	4.3e-94	BTB/POZ domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G08455.1	67.93	8e-91	330		BTB/POZ domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G02508	AT4G08455.1	237	73	1	1	237	1	234	67.93	8e-91	330
AfisC8G02508	AT1G01640.2	177	123	2	68	243	22	197	29.38	2e-16	83.2
AfisC8G02508	AT1G01640.1	177	123	2	68	243	22	197	29.38	2e-16	83.2

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00651.28	BTB	Domain	83	167	76.3	1.7e-21

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0042787	P	protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0001085	F	RNA polymerase II transcription factor binding
GO:0016607	C	nuclear speck
GO:0031463	C	Cul3-RING ubiquitin ligase complex
GO:0031625	F	ubiquitin protein ligase binding
GO:0042593	P	glucose homeostasis
GO:0043161	P	proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043433	P	negative regulation of sequence-specific DNA binding transcription factor activity
GO:0051246	P	regulation of protein metabolic process
GO:1902237	P	positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:2000676	P	positive regulation of type B pancreatic cell apoptotic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K10523	SPOP; speckle-type POZ protein	EC:-	Hedgehog signaling pathway	ko04340
K10523	SPOP; speckle-type POZ protein	EC:-	Hedgehog signaling pathway - fly	ko04341

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network