Detail information of AfisC8G02644


Location
GeneChrStartEndStrand
AfisC8G02644chr8518929830518938244+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020693801.19.6e-43ethylene-responsive transcription factor 2-like
SwissprotO80337.22.9e-36Ethylene-responsive element-binding factor 1A
trEMBLA0A2I0X2006.9e-43Ethylene-responsive transcription factor 1A

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G17500.149.512e-42 169ATERF-1;ERF-1ethylene responsive element binding factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag130854.t1
Allium fistulosumAfisC8G02644
Allium sativumAsa1G02596.1
Arabidopsis thalianaAT2G44840.1; AT4G17500.1; AT5G47220.1
Oryza sativaLOC_Os02g43790.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain10015047.91e-12

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0001944Pvasculature development
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0050832Pdefense response to fungus
GO:0005634Cnucleus
GO:0009409Presponse to cold
GO:0009864Pinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0009873Pethylene-activated signaling pathway
GO:0010200Presponse to chitin
GO:0044212Ftranscription regulatory region DNA binding
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding
GO:0051301Pcell division

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09286EREBP; EREBP-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.