Detail information of AfisC8G02738


Location
GeneChrStartEndStrand
AfisC8G02738chr8531190190531200641-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020261976.17.4e-235LOW QUALITY PROTEIN: probable serine/threonine-protein kinase At1g54610
SwissprotF4I114.11.8e-156Probable serine/threonine-protein kinase At1g09600
trEMBLA0A8B9AWL54.5e-210probable serine/threonine-protein kinase At1g54610

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G53050.147.616e-177 617Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag344867.t1
Allium fistulosumAfisC8G02738
Allium sativumAsa1G02511.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain149431241.87.2e-72

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0000166Fnucleotide binding
GO:0005515Fprotein binding
GO:0000398PmRNA splicing, via spliceosome
GO:0009615Presponse to virus
GO:0005829Ccytosol
GO:0004693Fcyclin-dependent protein serine/threonine kinase activity
GO:0007089Ptraversing start control point of mitotic cell cycle
GO:0008285Pnegative regulation of cell proliferation
GO:0010584Ppollen exine formation
GO:0032953Pregulation of (1->3)-beta-D-glucan biosynthetic process
GO:0043234Cprotein complex
GO:0043410Ppositive regulation of MAPK cascade
GO:0044451Cnucleoplasm part
GO:0048366Pleaf development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08819CDK12_13; cyclin-dependent kinase 12/13EC:2.7.11.22 2.7.11.23 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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