result

Gene information

Detail information of AfisC8G03082

Location

Gene	Chr	Start	End	Strand
AfisC8G03082	chr8	588290655	588295608	-

Sequences

CDS

>AfisC8G03082
ATGAGACTGCAGCCGTTTCCAATGTTAGAGATTCTGCAACAATCCAGAGATAACGAGGAAACTGCTTATTGCAGAAATCAAGTCATGGATAAATATAGACTAATGAAAGAGATCGGAGATGGAACGTGTGGGAATGTTTATAAAGCAGTTAATCTTGAAACTAATGAAATTGTTGCTGTTAAGAAAATGAAGAGGAAGTTCTACTATTGGGATGAGTGTATAAATTTAAGAGAAGTCAAATGTCTTCGAAGATTGAACCACCCTAATATTGTCAAGTTAAAGGAGATAGTTAAGGAGAACCATGAGCTTTTCTTCATTTTTGAGCACATGGAATGCAATCTTTACCAATTAATGAAAGATCGCAGAGACCCTTTTACTGAGGCTGAGATAAGAAGTTATATGTCTCAAATCTTGAAAGGACTTGCATATATGCATAAAAATGGATATTTTCATCGAGACATGAAGCCAGAAAATTTGTTGGTGAAGCAAGATGTTATTAAAATTGCCGATTTTGGGTTAGCAAGAGAAGTTATGTCAAAGCCCCCCTACACTGAATATGTTTCCACTAGATGGTATCGAGCACCTGAGGTGTTACTGCATTCTTCATTCTACACTCCTGCAATAGATATGTGGGCTGTTGGTGCAATTTTAGCTGAGCTGTTCACTCTGTCTCCATTATTTCCTGGTGAAAGTGAAACGGATCAAATATACAAAATTTGCAATGTTTTGGGGACGCCAGACAACAATATTTGGTATGAAGGAATGAGCTATCCTCCATCGGTAAATTTCAGCTATAAGATTCCACCAAGGAATCTTTCAGAAATTATTACCAATGCCAGCATGGAAGCAATTGATTTGATTCAGAAACTCTGTTCATGGAACCCACTGAAGAGGCCAACAGCAGAAGAAGCTTTACAACATCCCTTTTTCAATGTTTTGGCGAGGGTACCGTCTTCAACATATGAACACTTTCCCTTGAACTCAAGAACTGCAGAACCGAGACTTGAATTGAACCTCTGGGATTTTGCTAATAATGAATCAGATGACTGCTTTCTTGGTTTGACGTTGGCTGTCAAGCCCAGTGTATCTTCTTTAGATACAGCTAGTCATATGCCACATACTTCTGGAACGGAAATTATGTTTTGCTCGGGGTTTCAACATCAATCCAGACATCCAGTCTTTCTGCCATTTGTGTCCACAGACCTCAGCATAAGTAATACACCAAAGCCTTCCCTGTCATTTCCATATTCAATGAACAGCCAATCTTCACATCAAGCTGTAGGAGATCCGGAAGCTTCTGCATTCAGCAATCAAAATTTAGTCAATGGCCGACTTTTTGGGCAGTTTATTTCACTCTCCTCGCCGATTCAGCAGGGCAATTATTTTCAGTGA

Protein

Gene

>AfisC8G03082
TTAAGTCGATGCAACCAATACTTTGCGAAACAGCCTATTCGTTTCCTTTTACTTCTTATTTTGGATAGAATTTCTTTCGAATAGGTTTGAACAGAAGACGCCCAAATTCATTCAAAATATATCTCGAGAACAGTTTATGCGTACAGCTGTATCGGAATATATGTACTTTCTTTAATTTAGATTCTTGCATGCTGAAATTGGGTTTCGGGATATGGGTAGGTCATACATGACAGCCTTGACTTACGATTCAATATGTAATTTAGTTACATTAGTGATACGAATATACAATCATACAAAGAGTTCACTTATGCATAATCTCATCTGTTCATTTTTTTGTTTGCTCTAGGTTTAATCTATGAGTGGCGAGTTATATTGTAAAATCAATTTTACGTACAACTTTGTTTCTCTAGTGGTAATAAGATTTTTTGTGGCATAGATGATGTAAGGTCTTGAATTCATGACATGTTCTGTTTTTTATGTTGAGATTGCTTCCAAGATGCTAATTAATGGTAAAAAAGAATAAATTTCTATGTTTTACTGAAACAGTCATTTTTCTATTGATGTTTCTTACAAATCCATGCAATTTTACTTTTTTTGCTGCAGATGGTACAGTTGATTTCATCTCAAAGCTGAATTGAGAATGCCAAGAATGCTATGTTTTGCGTTCAATCACTCGCAATATGAGAGTACAATTTTTAACAAATTTGTTATTCCCGTCCTATTTTCTTGTGACTTCCAAGTAAGTAGAAGGCTTTTTATAGCTGCAGCCGTTTCCAATGTTAGAGATTCTGCAACAATCCAGAGATAACGAGGAAACTGCTTATTGCAGAAATCAAGTCATGGATAAGTGAGTTGTGATACAAGTTGATATATTTAAAATATAGGTTAACCTATGTTTGTTTTATCTGTCTGTGTAGATATAGACTAATGAAAGAGATCGGAGATGGAACGTGTGGGAATGTTTATAAAGCAGTTAATCTTGAAACTAATGAAATTGTAAGTGCCACAAATTAAGAAAACGTTATTTTTACTTGTTACCATGGAACAATGAATTGTATCATTCGTTGTAGGTTGCTGTTAAGAAAATGAAGAGGAAGTTCTACTATTGGGATGAGTGTATAAATTTAAGAGAAGTCAAAGTATGTATTGTTTCTCCTCCATTAATGGATAAATACAGTATGCTTGCATCATTTGAATATAAGGACAAATGTATGCTTCTTTGCAGTGTCTTCGAAGATTGAACCACCCTAATATTGTCAAGTTAAAGGAGATAGTTAAGGAGAACCATGAGCTTTTCTTCATTTTTGAGCACATGGTATGTACATTGTTATTCTTGTGTATATGTTTTCAGATGTTTCTTCACTGCTTAACAATTTTTTCATAATAAACTTCTGCTATTAAATTTAAAGTCACTAAACTTGATTTTTGTATCTTCAGGAATGCAATCTTTACCAATTAATGAAAGATCGCAGAGACCCTTTTACTGAGGCTGAGATAAGAAGTTATATGTCTCAAATCTTGAAAGGACTTGCATATATGCATAAAAATGGATATTTTCATCGAGACATGAAGCCAGGTTGGCCAATAGTTCATAACTTCATATGTCAGGATGCATAATATCGTTTTGAAATTTGATCCTGGATTAAAACTAAAAGTTTTATCTTTTTTGTAGAAAATTTGTTGGTGAAGCAAGATGTTATTAAAATTGCCGATTTTGGGTTAGCAAGAGAAGTTATGTCAAAGCCCCCCTACACTGAATATGTTTCCACTAGATGGTCAGTTAATTTATTTAAGTTGTATTTGCCACTGGTACTTTTTTTCTTGCATACATAATCTTATTTATCTATTTATGTTTATGATTGCTTATATTTGTTTACTAAGGTATCGAGCACCTGAGGTGTTACTGCATTCTTCATTCTACACTCCTGCAATAGGTACGCATGGTTCCTTGTGTATGTTTATGCAATGAGTCTTCAATTATTATTCTTTCAAGTAACAAATATAAGTGATTGATTCCTCTCTTTTTAACATGGAATTAAATTTGAGTCATATTTCAACTTTTGAGTTCTCTTCAATGTTAAAATCATTACGTGGCTGTTTTGCAGATATGTGGGCTGTTGGTGCAATTTTAGCTGAGCTGTTCACTCTGTCTCCATTATTTCCTGGTGAAAGGTACGAATGCTTAATCTTTTACTGCTAGAATACATCAAACAAATATGTGATTTGGTAGTACTATTTCAGTGAAACGGATCAAATATACAAAATTTGCAATGTTTTGGGGACGCCAGACAACAATATTTGGTATGAAGGAATGAGCTATCCTCCATCGGTAAATTTCAGCTATAAGGTAAAATGATAATAATTACTTGGTGTATCAAAATTTCTTGCTGGTTTGCACATCTTACTCTTTTGTTTGCTTTCTATTAGATTCCACCAAGGAATCTTTCAGAAATTATTACCAATGCCAGCATGGAAGCAATTGATTTGATTCAGGTAAATTAGTCAGCTTCTATCTTTTCTTTCTACTGTAAGTTTGTATATACTTACTTGGCTGCTTTACTATACTAGAAACTCTGTTCATGGAACCCACTGAAGAGGCCAACAGCAGAAGAAGCTTTACAACATCCCTTTTTCAATGTACTACTTCTACTATAATTATCTCGCTATTCGTTAGCGTCCACGCAAGAAAAAAATAACAATAAACATGCAGGTTTTGGCGAGGGTACCGTCTTCAACATATGAACACTTTCCCTTGAACTCAAGAAGTGAGTTTTAAAATATCAATGTTATGCAGTAAACTGCTATGATTTTAGTTCTAAGCAGTATTTAAATCTTTGCAGCTGCAGAACCGAGACTTGAATTGAACCTCTGGGATTTTGCTAATAATGAATCAGATGACTGCTTTCTTGGTTTGACGTTGGCTGTCAAGCCCAGTGTATCTTCTTTAGGTGCTTCTACTGCTAATTCTATTTGTTCGAAAGTTGTGATATGGAGACATTTACGTAATGTCTTTCCTTCAAATGAATATTGACTAGAATAACTTAATCAGTATGTCCCACATGTCATCATGAGCATATTTGGGGACTACTTATCTGACTTTTTTTTTAATAAATAAATAAATTGGTTGAGAATGGCTTAATGAATTGATTTTGTTGGTCCTCTTTTTTGTTTTTTAAGGCAACACAATGTTGTTTTTGACTTCCAAGTTGTAAATATTTTCACAAGGTGTAATCAAACACGATCTAAATATGCTTCTTGCTCAGTCGTTTGTAAATTCATACATATATTAGGACATTATTAAGTTTATTGTTGGAAACAACATATCTTACTGGTGATTGTCTCTCATGTGCAGATACAGCTAGTCATATGCCACATACTTCTGGAACGGTGAGTCAGCTGTGGATTATGAAATGACTTTCATGTTAATATGCATAACATCCTCCTTTTCTGGACTTGTCCTAACTTTATTTTTGAAACATTTACATGCAGGAAATTATGTTTTGCTCGGGGTTTCAACATCAATCCAGACATCCAGGTTATTTCCATGTTTGATCATTGAATTATTTATTACACACACAATAAGGAAGCGGCTATTGAGACATAAAATTTGATACAACAAATTCTCACCATTACATCTTTTTGTTTTTACATGGGAGGTGGTAATCAGGGAGGATATAATGATTGAGATCTATTGTGTCAAAGTGTGTGCGGGGATACAAAATGTAGACACAATTGGTGACATGGTGGATCTTGATCATTGGATTGCCTTCTGATTTCCACCTCCCATATAAGGACAAAAAGATCCAACGTTCAGGATCTTTAGTGTCACCGATAGTGTTTTATTTTGTGTTCAGTATATATAAAGGAGCGTTCAATGGCATCCCGAACCAGTGCAGCATCCCAACTGCCCTTTGGTATCCATCACAAGTTCCGATTTAAATAATAGTTTTTTTCTCTCTTCCCACTGCCACTATTGTTTAAATCGGAGTTTGTAGTGGAAATAAAGGGGCATTTGGAGTGCCGTACTATTTAAAGTGTCATTGAACGCTCCTTATATATATATATATAACAGGAGTGGAAATTATGAGCACATTTGGAATGAAGCAATGACATTGCTTCTTAATCCGTATTCTATATGATATTCCTAATTTTAATAGGAGTGAAAAATTGAAATTTCTGTTTGTCCTATGTTTCAGTCTTTCTGCCATTTGTGTCCACAGACCTCAGCATAAGTAATACACCAAAGCCTTCCCTGTCATTTCCATATTCAATGAACAGGTATGAATTTTATATTTTTATGCATCATTCATATTAAACATAATTATTATTTATTTTTGGATGAGTTGTAATAGTAGTATAAAATAACAAAATATTCTGTAGGTATATTTTTCTCGTTTGCTGTACCTACCCCAATATGCTAATTTGTGCACAAAAAAGGGTGTCATGTCCCCCATTAAATAAAAATGTGGCAGAAAAATAAGTTTATATACTTATTATGCTTTGGAAATTTGTATTAGTTTTTTCTAGGGAACTAGATGAATTAAAAATTATAACAAACATATTTTTATTTATAAAAGGATAACACCTTACAATTTGCTTTCTTACTGTGTAGCCAATCTTCACATCAAGCTGTAGGAGATCCGGAAGCTTCTGCATTCAGCAATCAAAATTTAGTCAATGGCCGACTTTTTGGGCAGTTTATTTCACTCTCCTCGCCGATTCAGCAGGGCAATTATTTTCAGTGAAAATACAATTTTTTTACATAAGAAGAAAGGATATGAATATAGCACCATTTTAATTTTTCTTTTATAGGCACCAAAGAACTACTGAACTGAATAAGTGCTGATTATTGCTGGGAAATTTGTACATTATTTTTTTCATCGTTTTTCCCGTTTAGAGCTGTGTACAGAAAACAGTGACTGAGAGAGCTAATAAAGACTTTATTTATTGTATG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020260715.1	3.7e-182	cyclin-dependent kinase F-3 isoform X1
Swissprot	Q84SN3.1	7.8e-145	Serine/threonine-protein kinase MHK-like protein 1
trEMBL	A0A6I9QAP3	2.7e-171	cyclin-dependent kinase F-3 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13020.3	56.16	6e-141	497	MHK	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G03082	AT4G13020.3	438	188	4	28	462	8	444	56.16	6e-141	497
AfisC8G03082	AT4G13020.2	438	187	5	28	462	8	443	56.16	2e-140	496
AfisC8G03082	AT4G13020.1	437	187	5	29	462	1	435	56.06	2e-140	496

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC8G03082
Allium sativum	Asa1G02214.1; Asa1G02355.1; Asa1G02356.1
Arabidopsis thaliana	AT4G13020.1; AT4G13020.2; AT4G13020.3; AT4G13020.4; AT4G13020.5
Oryza sativa	LOC_Os03g63020.1; LOC_Os03g63020.2; LOC_Os03g63020.3; LOC_Os03g63020.4; LOC_Os03g63020.5

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	32	310	257.8	9.5e-77

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000082	P	G1/S transition of mitotic cell cycle
GO:0005515	F	protein binding
GO:0000287	F	magnesium ion binding
GO:0001750	C	photoreceptor outer segment
GO:0001917	C	photoreceptor inner segment
GO:0003713	F	transcription coactivator activity
GO:0005930	C	axoneme
GO:0005829	C	cytosol
GO:0004693	F	cyclin-dependent protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005813	C	centrosome
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006974	P	cellular response to DNA damage stimulus
GO:0007283	P	spermatogenesis
GO:0008284	P	positive regulation of cell proliferation
GO:0008353	F	RNA polymerase II carboxy-terminal domain kinase activity
GO:0008356	P	asymmetric cell division
GO:0009409	P	response to cold
GO:0009555	P	pollen development
GO:0009793	P	embryo development ending in seed dormancy
GO:0010005	C	cortical microtubule, transverse to long axis
GO:0010235	P	guard mother cell cytokinesis
GO:0010444	P	guard mother cell differentiation
GO:0030496	C	midbody
GO:0031514	C	motile cilium
GO:0032391	C	photoreceptor connecting cilium
GO:0035720	P	intraciliary anterograde transport
GO:0035721	P	intraciliary retrograde transport
GO:0036064	C	ciliary basal body
GO:0040020	P	regulation of meiotic nuclear division
GO:0042023	P	DNA endoreduplication
GO:0045023	P	G0 to G1 transition
GO:0045494	P	photoreceptor cell maintenance
GO:0046777	P	protein autophosphorylation
GO:0072686	C	mitotic spindle
GO:0097542	C	ciliary tip
GO:0097546	C	ciliary base
GO:0098725	P	symmetric cell division
GO:1902806	P	regulation of cell cycle G1/S phase transition
GO:1902856	P	negative regulation of nonmotile primary cilium assembly

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08829	MAK; male germ cell-associated kinase	EC:2.7.11.22	-	-
K08830	RAGE, MOK; renal tumor antigen	EC:2.7.11.22	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network