result

Gene information

Detail information of AfisC8G03115

Location

Gene	Chr	Start	End	Strand
AfisC8G03115	chr8	592621893	592628210	-

Sequences

CDS

>AfisC8G03115
ATGTCTTTCAACCCTTACCATAAGCATTCATCTCCTACTAGTGCAACAGACAATTACTTCAGTTACTCAATGGATTCGGCATTGAATACTCCACTTGACATTAGCTTTTCCACTGGAAATCAACACCAAGATTGGAGCAAAGGCAGTTCTTCTGAGCTTTCCATGCTGGTTAATGGATCAAACGGTTGTATTATGACAAATCAAACCAATGCAAGTATTAAGCCCCGGTTAGGAGAATTTCTCATTGGACACTCATATTTCAATATTCTTAATGATAGCTACTCTAGCCTACAGCTACAACAAGCAGAAATAGTGACCCAAAGCAATCCAATCATAGAAGACTCTCAGTCAAGTTCTACTTTGCCTATGCTGACAATAGGAGTATTGGATGGGCATGTTGAGAACATAGCAACGTCGAAAAGTAATACAAACAGGAAAAAGGTCGATGAAAAATGTGATACTGACGGTCCAATGAACAAAAGAACTGTTCAGTCATTTGGTCAGAGAACATCAATATACCGGGGAGTTACAAGGCATCGTTGGACAGGAAGATATGAAGCTCATTTATGGGACAATACTTGCAAAAGGGAAGGACAAAGCAGAAAGGGCAGGCAAGGAGGTTATGACAAAGAAGACAAGGCAGCTAGGGCTTATGATTTGGCTGCTCTCAAATACTGGGGTGCTACAACTATAACCAATTTTCCAATAAGTACATATGAAGAAGAGATGGTAGAGATGAAGCACATGACTAGATTAGAATATATTGCATCTCTAAGGAGGAAGAGTAGTGGATTTTCACGGGGCGCATCCATATATCGTGGAGTCACAAGGCATCATCAGCATGGAAGATGGCAAGCAAGAATAGGTCGAGTAGCAGGAAACAAAGATCTCTACTTGGGAACATTCACTACACAAGAAGAAGCAGCAGAAGCATATGATGTTGCTGCTATAAAGTTCAGAGGCCTAAGTGCCATAACCAACTTCGAGATGAACCGCTACAATACTAAAAGCATTCTAGATAGTGCCGAATTACCAATTGGATACTCAGAATATCCCCTCAAACAGGCTTCTCATAATTCTACCTTAATGTCAACAATTGCCTTTCAACAAAAATCGCCATTTAACATACCGTATCCTTACTACAATTCACACCCAGCTCACATCTTTCATGATCTAAACAGTTTTCCCTCGTGCTCGACTTCACTTGAACTAGGCATGTGCACAAATTTTGATGCTAATATAAATCAAGGAAAGCAAATGGAGACAGATAATACTCTGGGATGGTCAGATTTATACGGAAGCGCATACTACAATCAGGCTACCAATATGCATAACCCATTGACGGCGCCTACTGTGCCAGTTTTTACCGTGTGGGATCAATGA

Protein

Gene

>AfisC8G03115
ATGTCTTTCAACCCTTACCATAAGCATTCATCTCCTACTAGTGCAACAGACAATTACTTCAGTTACTCAATGGATTCGGCATTGAATACTCCACTTGACATTAGCTTTTCCACTGGAAATCAACACCAAGGTAACCAAATAACATTTTATTTCAATCAGGTTAATAATCTTTGTTAAATACAGTAGTAAGCCGACGCACACAATGTGCATAAATATACGCCATTTATTGTATTCAGTTTAAGCTAAATTCATTCATTTTATATCATAGTAAATCATACATTAAATAAGGTACCAGTAATATACATAGTTTATATGATTTGGAGTTTTTTGAATTTTTTTTTGGGTTCACATATTTAAGTTCTATACAGAATGATGAGTTCGTTTAAAAGAACAGCAATTAATTTTGTGAATGAAATTAATTATTTATTATAATGTGCACACACAACATATCTATATATAATGAGAATACTTCCATTTGAAGCTTTTGAAATTACTAAAATACCCATGCGGAATGAGTGCTCTAGACTAGGGTTATAAAGGTCTTAGGTTCGAATCTCAAAAGACGGCAAAATTATGTTACTACTAATTTCACCATTTATTTAATCAAAATCTTTTTTAAAGAATATATATAATAAAATGGTTTTTTTTTCTATGTATACGTACATCGCATGTGCCTAAGTACTGGTATATATAAATGAAACAGTTTAACAAAACAAAGTAATAAAAAGTGATGTACGAGCTGCTCATTGGAATGCTGAAAAATCAAGTATTGGTTATATTAACTTAGAAAAGAGAAGAAATGGTATAACTTAAAAAGGGTAATTTCATCATTTTAAAAGGACACCGTTCGATCAAATGAAAATAGTGTCCTTAATCAGTAGTAAAGATATATATATATATATATATATATATATATTGGTATGCCAAAGTGGATTGAATGCATAGAACATCTTGGGAAAAAAATTTAAGGTTCTAGTTTCCCAACATTAACATGATGCAATTCTGGCTAATATATCTACACAACATATTTAAACTATTCTCTGGAAATTTGTTTCAATTTTAGTTGTAAATTTAAAAGTCTAATTAAGCTAGTTCATTGAACAGTCTAGGAATGGAAAGAACACATGAATAAATGTTGAACATGTTAATGTTCATTTTGAGGAAATTAACAACACTCAGTATAATGGATACCTCAAAAAAGAAAATGCAACCACTAGTTTGTTCAACTCAAATGTCCGAAACAAGACAAGACAAAAATAAATAGACATAAGAAATCTTACCACTGTGATTTCTTTCCTTCAATTGCAGATTGGAGCAAAGGCAGTTCTTCTGAGCTTTCCATGCTGGTTAATGGATCAAACGGTTGTATTATGACAAATCAAACCAATGCAAGTATTAAGCCCCGGTTAGGAGAATTTCTCATTGGACACTCATATTTCAATATTCTTAATGATAGCTACTCTAGCCTACAGCTACAACAAGCAGAAATAGTGACCCAAAGCAATCCAATCATAGAAGACTCTCAGTCAAGTTCTACTTTGCCTATGCTGACAATAGGAGTATTGGATGGGCATGTTGAGAACATAGCAACGTCGAAAAGTAATACAAACAGGAAAAAGGTCGATGAAAAATGTGATACTGACGGTCCAATGAACAAAAGAACTGTTCAGTCATTTGGTCAGAGAACATCAATATACCGGGGAGTTACAAGGTTTGATGTTCATATAATTAAGATTTATACTGAAAAACGATCATTATTTATTTGTAGCTTTTAAGATCATATTACAATTGGCCTTTTTAGTAAAAGCATTCACTCATTCATGTAAATAGTAATGATATGTGCAATAGTGTTTCATTATCTTAAGAAAATATTAAGCACGTTTGCATTGTTTCCATGCATTGATAGTAAATAACCATATTAATAGACCTATTATAATTGGTCTGTATTTTGTACAGAATTTGAAAGACTACAGAGTTTCTTGTACATTTTATGTCTTCCACAAAAGGCAAATCTTATATCATCTGATAACAAATTTGAATTCCAATAGACATCACGTTCAGTAAAATATGTAGTTTTAACCAACAATTTTATAGATATAGTAATATTTGCCACATTCAAGTAAAGATTCAAGTAGAAAAATAATATGTTGAAGAAAAAAAAACTCGGAAAGCTATTTTGTCTAAATATGACAGTAGTAGTCTAAGTAATTAAGATCATTATCAGTTGCACATCAATCAAATACCAATATGCGATATTTGAAAGAAACAAAATCTGGATAATATTTGGATACCAGTATCTGGAAATGTCGGACATGTAATAACATCCATATCGGCTACATAGCAATCAAATACAATAATGTGATAGTTTAAAATATTGGAATAATATCGGTCAGACGCATTCTTTAAGGCAAACACATCATTACTTGTAACTTTAGCTCCACGTCAATATATGAATATTCATATAACAAAATCAATTGTTGACAACTGTTCTCGGTCACAATGAAACATTCAAATATACTAATTTTAAAATAATCAACTCGGGAATTTGATGTAAATGAAGCTTCAATCTAAATAATTGTATGAAACTGAAATTGAAAACCACAGAAAATCATGCAAAACCTATGGCAATAAGAGGATTGCAATGTATTAAAATATTCTGAAACTTGAATAAAGAAGAGAAGTAAAGTTTACACAAATCATGATTAAGAAAGAAAGTTTGAAAGAAGCATTATAAATCTTATTAATAGATCAAAATTAAGGGATAAAATATAATATGTAATAGAAAATACTTCGATGGGTCATTGATATTTGATCATTTACAACATTGAAATGTGAAAGTTACCTGGATTTTTTGTCATTGCATGCACTGGAATAACTACTGGTATTTCACTATTTCCTCCAAAAAAAATTAGAAAACAATTAAGGCGTGGGAACATAATATTGGTAAATTTTGGTCCATGTTTTGCGGCCGATATTTTAGTCAAAATTTAAAAAGTAAAACAATGTCCAACATTCAAAATTTGGCCGAAATTCCCAAAATTAACTACATAGACCATAGTACGGTCGCATGATAGTTCACCTTAACCAGTAAAACAATTGATATCCATGTGTTGGATACATAATGTGGTTTGAAATGAATGACCGTGATGTGAATTTGTTAATATTTACTTGAAATACTAAAGTCTTAAAATCTTAAAACTTGAGAAAACAAAATGCAAGTTCTTCAGTGTTTGTATGAGTATTGTAAGCACTAATGCTAAAATTTGGAGTTAAGAAGCTATTAGGGCTGCTGGTACCTTAAACTTTATACTTCACAACATAGAGCTGGTTTTCTTCAAGTGTCAACCAATTTAATTTTTAGCTTTTATGCAAGTTATTCTTTAATGAATTTATATTTTTTAGTTTTTACTGTGATATAAATATAAGCTTACAAAGATTTTTTAATTATTATATTATCAACCAGTTGAAAATTGGTCATTTATATATTTTTTTAATATTTTTCTATCACAATACATTTTAGAAATTCTGACCACAGCCATTAATTTTTTTAGACAAAAAAATATGAACAATGAATTAAGAGTTCAAAATATTGTTAAGAGTACCACAGAAATTCACATCTAATTTAAGACGAAAAGTCTTTTCTTTTTTCAAAGAACATAGTATAGATATCTGACATGCAACAATCTTTTATATATTTATATGATGTTTTTAACCTGCAAATTGGACACGCAATACTTTTCGATCCAATTTTGTTACGATAAATTATTTCTATTAACATTACAATCTACTTATTTATTGTTACTACCCAATTTAATGAGTATATAAAGTATGATGTTCAGTTTGAAACACACGTGAAAATCTCTAAAACAAATAGTTTGGTTGAATTTGCAAAATATTAATATATTATACGTAGTCTAATGAGAGAAAAACAATATAGAATAGTTTTGACGTTGGGCTAAACTTTTATACGTAGTTTAATGTATTGTTCATTGAAGGATATAGGATCAAAAAAATATAACTTGCCCTAAGGAATTATACAAAACTGTTATCGAACTTTTGTATCAAATGGTTCAGAGAAGCTAAGCATGTATGCAACATAAGCCTGAATGTATCTGTGATCACAAACCTTGGTATGCGCTATCATATAATCCAGGTAACTAGTGACTTCACTTTCAAGCAAATCCTTGGATCAATCACTAGCCCACAACATGAGAACAAATTTGTTCTCCCTCGGTTATTGGTGTGATAAAACCAAATTAAACTCTTGAATTTCTTTTTTTTCATTATCCTTTTCAATCGCCCGAATCTCTCTTTGCCTTGTCACCGTACATCTCATATTATAATTTGCAAATCCATTTCACTGGAACCAGGCATCGTTGGACAGGAAGATATGAAGCTCATTTATGGGACAATACTTGCAAAAGGGAAGGACAAAGCAGAAAGGGCAGGCAAGGTATAACTGTAAATTAAAAATATACATAAAAAAGAAATACTCTCCAATAAATGTTGTTATTACTTGATATATTTGTTGAGTTAATTTCTAAATATTTGGTAATTAATAACTGACTTTAATTATCTTCCCATCTCAATACTATGGACCATATATGGAACTGGATCTGATATAATGCAGTCTACTTGGGTAAGTAGAGTACCAACTCATCAACATGTAATAAATTTTGGTACCATTATCTAAACTTTTATTGGTTATAAATTTTCAGGAGGTTATGACAAAGAAGACAAGGCAGCTAGGGCTTATGATTTGGCTGCTCTCAAATACTGGGGTGCTACAACTATAACCAATTTTCCAGTAAGTAATATTTTCCGAATGTGGCCCAATTTATTTAATCGAGACTGGACTTATATATGACGCCACTATATTACAACAACCAGATAAGTACATATGAAGAAGAGATGGTAGAGATGAAGCACATGACTAGATTAGAATATATTGCATCTCTAAGGAGGTATGAAATTATTTCTCTTTATTTCATAGCATCTAGTTGGCGCATATCTGTGTGCAAAACTTAGAGGACTTCTTTGACAGGAAGAGTAGTGGATTTTCACGGGGCGCATCCATATATCGTGGAGTCACAAGGTAAATTTGTGTCCTGAATCTCAGTAACCAATAGAATGGACACTCTATATCTGATTATATGAAAATGTATCATACACGATAATCTTCAGGACGAACAAGATGAAACGACATTCATAGAAGTTAAAATATCACAATAGCTATCTGAATTAGGCAATGCTATGCAGTTTAGACTATGTTCATCTGGGTATCTAAATGTAACACTTCCAGAATTATTAGCCAAGCGAGCACTAGATTTGGCATATAGACAAAAACAAAAGGCTGCATCATACCTGACTCGGTTTACATTAATTTAGTAGTTAAGCTGGATACAATGTATGTGTTGATGCAGGTCTGGTGTGATTTGCAAAATTCAAGATATAGATTGAGCATTATATTAGTCCATATAAAAATTCCAATAGTTTCTCCTCTCTTTTTTTTAGCTTGTATGCCTTTGAAAGACATATATAATATAACCAAAAATTAAGATGCATCAGCGTTCAATTATGTAAATTCAATAATTGTAAATGATATTGATTGAACTTACAAATGTACAAAATCTGTATTATTCAGGCATCATCAGCATGGAAGATGGCAAGCAAGAATAGGTCGAGTAGCAGGAAACAAAGATCTCTACTTGGGAACATTCAGTGAGTCCCAAACATCTACAAACAATATTAGCAAATATCACAAAATACACATCGATAATCTTAAAATCGAATTATCACAACTGTGTATGCTAATTAATCTATCTCTATATGACACATTTAGCTACACAAGAAGAAGCAGCAGAAGCATATGATGTTGCTGCTATAAAGTTCAGAGGCCTAAGTGCCATAACCAACTTCGAGATGAACCGCTACAATACTAAAAGCATTCTAGATAGTGCCGAATTACCAATTGGATACTCAGAATATCCCCTCAAACAGGCTTCTCATAATTCTACCTTAATGTCAACAATTGCCTTTCAACAAAAATCGCCATTTAACATACCGTATCCTTACTACAATTCACACCCAGCTCACATCTTTCATGATCTAAACAGTTTTCCCTCGTGCTCGACTTCACTTGAACTAGGCATGTGCACAAATTTTGATGCTAATATAAATCAAGGAAAGCAAATGGAGACAGATAATACTCTGGGATGGTCAGATTTATACGGAAGCGCATACTACAATCAGGCTACCAATATGCATAACCCATTGACGGCGCCTACTGTGCCAGTTTTTACCGTGTGGGATCAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK72427.1	2.1e-121	uncharacterized protein A4U43_C04F19320
Swissprot	Q6PQQ4.2	1.1e-93	Protein BABY BOOM
trEMBL	A0A5P1F4T8	1.5e-121	AINTEGUMENTA-like 6

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G17430.1	84.34	3e-99	358	BBM	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G03115	AT5G17430.1	198	28	1	160	354	198	395	84.34	3e-99	358
AfisC8G03115	AT1G51190.1	238	65	2	118	347	131	368	69.33	2e-96	349
AfisC8G03115	AT5G57390.1	194	30	2	157	347	188	380	82.47	5e-96	348

Ortholog group

Species	Genes
Allium cepa	g540867.t1; g94568.t1
Allium fistulosum	AfisC8G03115
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	171	227	33.8	2.7e-08
PF00847.17	AP2	Domain	270	321	39.7	3.9e-10

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000723	P	telomere maintenance
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006110	P	regulation of glycolytic process
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007389	P	pattern specification process
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009734	P	auxin-activated signaling pathway
GO:0009737	P	response to abscisic acid
GO:0009744	P	response to sucrose
GO:0009873	P	ethylene-activated signaling pathway
GO:0010073	P	meristem maintenance
GO:0010187	P	negative regulation of seed germination
GO:0010449	P	root meristem growth
GO:0019432	P	triglyceride biosynthetic process
GO:0019827	P	stem cell population maintenance
GO:0040008	P	regulation of growth
GO:0045723	P	positive regulation of fatty acid biosynthetic process
GO:1901959	P	positive regulation of cutin biosynthetic process
GO:1904278	P	positive regulation of wax biosynthetic process
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09285	OVM, ANT; AP2-like factor, ANT lineage	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network