result

Gene information

Detail information of AfisC8G03370

Location

Gene	Chr	Start	End	Strand
AfisC8G03370	chr8	629857028	629860647	+

Sequences

CDS

Protein

Gene

>AfisC8G03370
ATGATAAGCAGTAAACTTGTAGTTAGGTGGAATCACGTTACTTATTTCACACAGGTAAACGAGGAATTAAGAAATAAATGACCCTGTTTGCAAATGTAACTAAAAATGCACGTAGCTTCCCCTGCAAAGAAGAGATTGTCCACCGGAGTTCTTAGCCACTCGTGTAGGTAATGGGGCTTGCCCACTGCGTCGTAGCTGTACGAGCCCAGAGAGTTTGGGTCTGAACCCCAGTGCGACACTAGGTGGTTTATCTGCATTAATTATATGATATTTTGTCATTCATGAGTTCTAAAAGTACATCTTTGAACTAGGGGTGACAATTAGTTTCGGGTCGGGTCAGTTCGGACCCAGGTGGTCGAATCTATCGGGTCGGGTCTTTATGGTATTTTTCATCACTTAGACCCGACCCGAGACCCTTCAGATTTAGTTTGAGTTCGGGTCTTAGATCAGTTTGGTTCTGCTTTTCAGTTCTGGATTCCAATTGCTTTGCAGTTCTGGATTCCAATTGCTTTGCAGTTCTGGATTCCAATTGCTAGCCTACTTTAAACTATTGAATGTACGGTTCAATCACAAACCATTGTTTTAAGCAGATTTAGTTCAACTAAAATGCACTAGCTATTCTAAACCATTACATCTGTGATAGTATTGATTTGGCTGCAATGAAGTCTTAATTTTCATAGTTTTAAACTTGAATTATATTATTAGTTAAATTTAACTTTGTAAAATCATTTTCAACAAACTACTATGTTAATTTAGATCTTCCTTTCTAATTTTTTTGACACAGATCTCTGCTTCTAAAATTCATCTTAATTTTCATAGTACTTTGAGTTTGAATTAAATTATTAGTTAAATTAAATTTGTAAAATCATTTTCAACGAACTACTTCTATGAAAAATAAGATCCATTTCTATTCAAATATTAAATTAAGTTTGCAATAAATAATTTCTTATTGCTAATATCTATTCTAGTACAAGTCAGTGACTTAGACATTATCTCACATATAATAGATATGAAATTCATTAAAAATATGCATGTGGCAGTGGCACATATGTGTGTGTTTTGGTTTACAAATATTTGAGAATGGCGCACGATAACTATTTTTGTTTGAGCGGACATGAGGTGAAGAGAAGCTACATTTATGTTAATTTATGTTTAGTTATAGGACATATTATAAAATTATGTGATAGTTCAAGTTCCATTATAATAAGGGTGTGTGATAGTTCAAGGTTCATTATTGGTAATCGTCTAATATGGTGAAAAATTTGTAACGTAAATTAGTTGTGCTTTTAGATCGATATACATAGAGGATGGACCTTGAATCTACTGAATTTGTTCACCATGTAAAACATAGACTTTATGTATCTGTTGTAATCCAAATAAATGGCAAACATTGAAAATGAACGTGAGTAATCACATGAAAGCAATTTATTCAAGATTCTCACATGGATGTTTGCTAACATTTTAATATGTGTAGTTCAACAACCATAGTTCCACGATTATTTCATTTTTTCTAACTTTGGTTCTGATTGGAACAGGTTTCTGCTAGCAAAACAAAGATTTATATGGTTTTAGAATACGTCAATGGCGGCGAACTATTTCAAAAAATTATAAGCAATCCAAAAATATTTACTATCAGAGGGCATTGCTAACCTTCTAAAATAATTCAAAATTATTTGCAGCTTGAAAATGTCCTTGTTGATTCAAAAGGAAACACCAAGATATCTGATTTTGGCCTTAGTGCGTTGCCTGAACAGCGTAGAGTATGGTTCTCACCGATTTCCCAAAGATACATCTCTTTAATATTTTAATTTGTTTCAGATATTTTTATTAAGTTCTCATAATATCCTTATTAATTCAGAGTGATGGATTACTTCATACGACATGTGGAAATCCTAATTATGTAGCTCCAGAGGTAAAAACTTGAACTTTGCATGGTTAATTATCACTAAAATACTAGCATAAGCCAATGTCATTTAGAGTTATTTCAGTCATGGGTTGAGTTATTCATAGTGCCATTTTTGAAGGTGTTGGCTAATAGAGGATATGATGGTGCCATGTTGGATATATGGTCATGTGGGGTTATTCTATATGTGCTTCTGGTAGGATGTCTTCCATTTGACGATAGAAACCGCGCCGTTCTTTATCTGAAGGTACAAAACAAAGCTTAACTAATTTTTTATACATCTTGGCAGTCAATTGACCCAAAAAAGGGTTTTTTGTACAAGATTCTTCATTTATTTGGATTACAACAGATACATAAAGGACAGTTCAAGCTTCCCAGATGGATTTCTACTGGAGCATCAAAGTTGATTCGCAGAATTCTTGACCCAAATCCCACAATGTTAAGTGTGAATTATCCACAAAAGCTTAAGATGGACTTCGGGTTTAGCATGAAAGTTGAAATATTTGTCAAGTTCAACCTTTATCTTTGCTTCACAATGCTTGTCAATTCCTTTGCAATTAAAAATTATTTCTTTTCTGTTGGGTATCCTTAATTTATAACCTTTTCCTTCTCTTACAAGATTCAATCATGTAATTTCTCTATGTTTCTTTATCTTCCATCCAATATATCACAATACAATCACAAACAATCATTTCATTTTTGTTTCCACTCTAAAGGTTGCGAGTTCATGACATCAAGTATTTGTGGGGGTGTTGCCGAGGTTATATACGAGCGATAGGAGGGTAGTACTGCAAAATATGAAAAGGAGTGAATGGGGTTAAAAAAGCAAGAAAGAAACCATAGTGCTGTGATTTTATTTTACTTTTATTTTAATCTATAGCCGTGCTTGTCTTTATTCAGTCATATATAATTGGCTACATCATCTTATGCGTACTCTGTTTGATGCTTCGAAACATATATACATGAAAACTATTTGTTCCAACAATTCAAAGGTCCATTTATAACAGAACTGAAGGTTCACAAGTCTCTTTAATTAGCATTGTTCATATATTTCCACTTTATGTCCAATTCATTTATTCTTTATTCGAATGTATGATTATGATATGTCACTGGAATCATGTACATTTACCTCAGTTTCAGTATAATGGAACAATGCTACTTTTTCTATAAGCACTCACTTGCCTTTGCCACTTTTTCCTAAAAATGTTCGCTGTAGAAATCAATAAAGCGAAATCTGACATGTATAATCAACGCAATCAATAATCAATGTAAACCGCACAAACCTTTGGCAACATAGTACAGTTGATCTAGTGCTTGTTTTGTTAAGGTTGTCTTCATTTCCATCTAGATATATTTGGTATTGCCATAATAGTGCATTATTTGCTGTATTATTACAGTTATTCTTCTCATCATTTCTAAAATGAATATCATATATGTGCCATACTTAAATTTGATACATCGTTAAAGTTATTCTTCTCATGATTTCTGAAACTGCATAGTGTGAGCATGTATTTATGTTTTTGTTCTTGTATTTGGAAAATCACAAATATAGGCACAATATCAAGCTAGAATTGAAGAATTGAAAAGTCAAGGCACAGTTAGGGATGGCAATGGGGCGGGTCTAGGGTCCAAACCCGGTCGACCCGCCCCTGTTTTGGCCCGTCAAGACCCGCCCCATTGGGTCATTGGGGCGGGTAGACCCGTGACCCGTTCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3456438.1	3.0e-35	hypothetical protein FNV43_RR01088
Swissprot	Q8RWC9.2	3.1e-37	SOS2-like protein kinase PKS13
trEMBL	A0A8K0HQT0	2.2e-35	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G17510.1	80.68	4e-39	157	CIPK1;SnRK3.16	CBL-interacting protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G03370	AT3G17510.1	88	17	18	105	145	232	80.68	4e-39	157
AfisC8G03370	AT3G17510.2	88	17	18	105	65	152	80.68	6e-39	156
AfisC8G03370	AT1G48260.1	85	20	18	102	136	220	76.47	2e-35	145

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	20	106	78.1	5.9e-22

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005267	F	potassium channel activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007584	P	response to nutrient
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0010107	P	potassium ion import
GO:0010118	P	stomatal movement
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network