result

Gene information

Detail information of AfisC8G03394

Location

Gene	Chr	Start	End	Strand
AfisC8G03394	chr8	633819129	633822205	+

Sequences

CDS

>AfisC8G03394
ATGGAAAAGGTAGCACAAATACAAGAAAAGAAGCTAAAGGAGCAACTTGCTGCTGCTGTTGAAAATTTACAGTGGAGTTATGCAATCTTTTGGTCTAGCTCAATCACACAACCAAAGGTATTATCATGGTGTAATGGATATTATAATGGAGACATAAAAACAAGGAAAATCACAAATCAATTGGCAACTGAATTTAAGGAAGAAGTACCCGGTTTACAAAGAAACGAGCAACTTAGAGAGCTTTATGAATATCTATCCACAGACAATAATGATAACAGTCAGCAAACAAGGCGGCCTTCTACTTCATTATCTCCTGAAGATTTAACTTCAACTGAGTGGTACTACTTGGTTTGTATGTCCTTCACATTTGGCCAAGGAGAAGGGTTGCCAGGAAGGGTATTAGAAAGCAATCGGTATGCTTGGGTGAGTGGTGTCCAATTTGTAGATAGGAAAACTTTCTCACGTTCGATTTTAGCAAAGACAGTTGTATGTATTCCTATTATGGATGGTGTTCTTGAACTTGGAACTACAAAATTTGTTTTGGAGGATCCAAACCTTGTACAGCAAATCATGGAAATGTTTTGGGAACGACCATGTCCAGTATACTCTGAGCATTCATCGTCAAATTCCTGGATAGTAGAAAAGGATGAATTAGAAGACAACATGGACAATATATTCAATGATGCACTGCAAAATCCATTAACTCTAGACAACCATGACTTCAACCATGATAACATGACACCATTTTCTTTTGATTTTCCATTTAGGCTTAACGAAAATAATGAACAAATGCAAGAGATACAAACTGCTTCTTCGAATTCTAGCTCTTTTAATGGTTCTTTTAAGGTCAGCACACTGAATGATTACATCCAAAGTGAAAATTTGGAAAATCTCGTGGACAATAATCGCTATATAAAGACACTTTCAGCTATTTTGAATAACTCAAAAGGGTTAAACTCTTCTTCGGTCTTTCCACTTGGTTCTCATGCATCAAGTTTTACAACATGGAGAAGGAATTTGAGTGTGAATAATAAGGTAGGTGGGGTGTCTCAGAAAATGTTAAAGAAGATTTTGATATATTCTTCTTGGTTTACAGAAGAATGTGACCGCAGAAATAAAGCTTCAAAACAAGAAAAAGACAATGTGGGAACAAGCCATGTATTGTCAGAAAGGCGAAGAAGAGAAAAGTTGAACGAAAATTTTCTTGTTCTTCGGGCGCTTCTTCCTTCCGTGTGCAAGGTGGACAAAGCATCGATCCTCGGCTATGCAATAGAATATCTAAAAGAGCTTGAAAAACGAGTAACAGAGCTCAAATCTTGCAAAAATACAGTAGAAGTACAGGCAAGAGAAAAACAGAATAAAACTGAAAAAACGTCCGATAATTTTAGAAACAACTTAAATAAAAAGGCGAACAAGCGGAAAGCTTGTGATATGGTTGAATCAGAAGGTACATGCATAGATGTTAATGTGATTGGAAAAGAAATAATGATAGAGTTGAAATGCGCTTGGAGAGATTCTTTACTACTAGAGATTTTCAATGTGATAGATGATCTTGAGTTGGAAACTCAGTCAGTGCTATCTTCCAATGTGAATGGAATACTTTCACTTACATTAAAAGCAAAGTGTAGAAACACAACTATAGTATCACCAGGAACTGTCGAGATAGCACTTTGCAGAATTACTGGAAAACACTGA

Protein

Gene

>AfisC8G03394
ATGGAAAAGGTAGCACAAATACAAGAAAAGAAGCTAAAGGAGCAACTTGCTGCTGCTGTTGAAAATTTACAGTGGAGTTATGCAATCTTTTGGTCTAGCTCAATCACACAACCAAAGTTAGTTAGtTTTTTTTTTTTTTTTTTATAGAACAAGAAAGAAAACATTTATTTTTCATAGGTTTATCTTGTTAAAGCTAAATATCAGTATTTCAGGGTATTATCATGGTGTAATGGATATTATAATGGAGACATAAAAACAAGGAAAATCACAAATCAATTGGCAACTGAATTTAAGGAAGAAGTACCCGGTTTACAAAGAAACGAGCAACTTAGAGAGCTTTATGAATATCTATCCACAGACAATAATGATAACAGTCAGCAAACAAGGCGGCCTTCTACTTCATTATCTCCTGAAGATTTAACTTCAACTGAGTGGTACTACTTGGTTTGTATGTCCTTCACATTTGGCCAAGGAGAAGGGTATTAATACTAAAATATACTATAGAAAATATGATAATTATCATAAATTAAAATATGATATTATTGCTATGTAGGTTGCCAGGAAGGGTATTAGAAAGCAATCGGTATGCTTGGGTGAGTGGTGTCCAATTTGTAGATAGGAAAACTTTCTCACGTTCGATTTTAGCAAAGGTTTGAAGCAGCTGCTAATTTTCTCATGAACTAGTTCTTTTTATATATTTTTTCTACATGTATTAAATATCTTGTTTTATCCCCCCCCCCCCCCCCCTCCATTTTCTATCTGCTGTTTCTGGGTTGCTTTGATGCGCTATGCTTCAGAGTGCATCGATTCAGGTACATGCCAATTATCTTTTCTTTAATGTTTCCAGGTTGAGTGCCTTCGGTATAGAGTATAAGATTTATTATTTGTCTAAACCTGGAAACTGGCATTCATGAAGAAGAAAATGTGACCACCACTAATTATCATGGCTGATTCGTGATTTTTTTTTTTTTTCCATTGCAGACAGTTGTATGTATTCCTATTATGGATGGTGTTCTTGAACTTGGAACTACAAAATTTGTAAGCACAATTTGCATATAAAAAATCAAGTAAAACAAATCTGCAAATTCTATGTAAATATTTCAGGTTTTGGAGGATCCAAACCTTGTACAGCAAATCATGGAAATGTTTTGGGAACGACCATGTCCAGTATACTCTGAGCATTCATCGTCAAATTCCTGGATAGTAGAAAAGGATGAATTAGAAGACAACATGGACAATATATTCAATGATGCACTGCAAAATCCATTAACTCTAGACAACCATGACTTCAACCATGATAACATGACACCATTTTCTTTTGATTTTCCATTTAGGCTTAACGAAAATAATGAACAAATGCAAGAGATACAAACTGCTTCTTCGAATTCTAGCTCTTTTAATGGTTCTTTTAAGGTCAGCACACTGAATGATTACATCCAAAGTGAAAATTTGGAAAATCTCGTGGACAATAATCGCTATATAAAGACACTTTCAGCTATTTTGAATAACTCAAAAGGGTTAAACTCTTCTTCGGTCTTTCCACTTGGTTCTCATGCATCAAGTTTTACAACATGGAGAAGGAATTTGAGTGTGAATAATAAGGTAGGTGGGGTGTCTCAGAAAATGTTAAAGAAGATTTTGATATATTCTTCTTGGTTTACAGAAGAATGTGACCGCAGAAATAAAGCTTCAAAACAAGAAAAAGACAATGTGGGAACAAGCCATGTATTGTCAGAAAGGCGAAGAAGAGAAAAGTTGAACGAAAATTTTCTTGTTCTTCGGGCGCTTCTTCCTTCCGTGTGCAAGGTAATCAAAATTTATACAATAAAAATAAGAATTATATCTACCAGAATGCACTAATTAAATCTATAATTAAAACATGATTGTTGAGCTTGTAGATATAAACCAACAAATTGACATCTTATTTGTCCATACTTTATATTTAGGAATACTATATATTATGTTAACATGAGTCCTTAGCTTAAATTTGTTATCTTCCTTGTAAAAGATACCAATTTTTTGATAATGCAATATTCATCATGTTTATGAACTTGAGATACAATGATATCCTACTTGGGGAGAAAAAAGAGGTTGTGTTTACATAAAATATATTTGGACCGGGTTAGAAAACCTTGTGCATTTTTTGTATACATTTTTTAAGAAATACAAGGACTTCGCAATTGATGTTTCTTTGAAAGCTCATAGTATACTAATATTATTTGATTTTAGGTGGACAAAGCATCGATCCTCGGCTATGCAATAGAATATCTAAAAGAGCTTGAAAAACGAGTAACAGAGCTCAAATCTTGCAAAAATACAGTAGAAGTACAGGCAAGAGAAAAACAGAATAAAACTGAAAAAACGTCCGATAATTTTAGAAACAACTTAAATAAAAAGGCGAACAAGCGGAAAGCTTGTGATATGGTTGAATCAGAAGGTACATGCATAGATGTTAATGTGATTGGAAAAGAAATAATGATAGAGTTGAAATGCGCTTGGAGAGATTCTTTACTACTAGAGATTTTCAATGTGATAGATGATCTTGAGTTGGAAACTCAGTCAGTGCTATCTTCCAATGTGAATGGAATACTTTCACTTACATTAAAAGCAAAGGTTTGTCTTTTTTTTTTTTTTAAATTTTATTGTTTTCTTAGACCAGACATAAGGTTATAGTATTACGTGTAAATAATAAGCATAAGATTTCAGCTTAGTATATAACTCTTGCACCAATAGTCAGATTAATTTTCTGCTATTATTGTTAAGAAACTCTTTTATATGAAAAATAAAATATGTGTGAACAATGAGATTGATTCATTTAAAAACTACTTCTTATGGCCCAAAGCTGTCTTACGGTATGCTAAATACATGTTACCAATTTACAAGCTACATAGCATATGACATTTCTGTACACATCATGTTTTTCTACTCAAATTTTATTATTTTTAAATGAACAAATACTACTAGAAATTAGTGATATTAACTTGAGAATTTTTGCTTACCTGCAGTGTAGAAACACAACTATAGTATCACCAGGAACTGTCGAGATAGCACTTTGCAGAATTACTGGAAAACACTGA

Functional annotation

Database	accession number	e-value	annotation
nr	QFU95050.1	5.7e-294	bHLH transcription factor
Swissprot	Q9CAD0.1	6.2e-88	bHLH transcription factor bHLH002
trEMBL	A0A5P9Q3E6	4.1e-294	BHLH transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G63650.1	39.53	1e-97	353	AtEGL3;ATMYC-2;EGL1;EGL3	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G03394	AT1G63650.3	592	303	15	12	560	13	592	39.53	1e-97	353
AfisC8G03394	AT1G63650.2	592	303	15	12	560	13	592	39.53	1e-97	353
AfisC8G03394	AT1G63650.1	592	303	15	12	560	13	592	39.53	1e-97	353

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF14215.3	bHLH-MYC_N	Family	12	194	158.8	1.4e-46
PF00010.23	HLH	Domain	384	431	41.7	7.5e-11

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006950	P	response to stress
GO:0007275	P	multicellular organism development
GO:0009628	P	response to abiotic stimulus
GO:0009718	P	anthocyanin-containing compound biosynthetic process
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0009891	P	positive regulation of biosynthetic process
GO:0009957	P	epidermal cell fate specification
GO:0010026	P	trichome differentiation
GO:0080090	P	regulation of primary metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network