Detail information of AfisC8G03439


Location
GeneChrStartEndStrand
AfisC8G03439chr8646392250646438639+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020248134.12.4e-255LOW QUALITY PROTEIN: uncharacterized protein LOC109825676
SwissprotQ8BW49.12.1e-09Tetratricopeptide repeat protein 12
trEMBLA0A8B7D5S11.4e-220SET and MYND domain-containing protein 4 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G33400.140.432e-164 576TPR9Tetratricopeptide repeat (TPR)-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag274840.t1; g274841.t1
Allium fistulosumAfisC8G03439
Allium sativumAsa0G01698.1; Asa1G01890.1
Arabidopsis thalianaAT1G33400.1
Oryza sativaLOC_Os10g36250.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00856.25SETFamily22552421.70.00019

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11426SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYDEC:2.1.1.354 2.1.1.357 Lysine degradationko00310

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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