result

Gene information

Detail information of AfisC8G03616

Location

Gene	Chr	Start	End	Strand
AfisC8G03616	chr8	674378670	674380862	+

Sequences

CDS

Protein

Gene

>AfisC8G03616
TCTGAGGTGCAATTGCTTGAGGGGCAAAAGGATGTGATAAAGGAAATACAGAAACAGCATCATCACGAGGACATGCAAGAATTGTATGAACAAGCCGGAAATTTGCCAGGGAAGCAGATATCAAAGTATATTCATGAATCATGTAAAAACAAGGATTATCCTAGGGGTAGTGCTGTCTGGGATATATTCAGGATAAAGGACGTGCCAAAGCTAGTTCTTTACCTGCAGGAGCACTGGAAAGAATTTAGGCATATCAATCAAGCTCCTTTGGATTCAGTAAGGATCTATGCTATTGAATTAGTGTTTTTACTTTTGAGTGTGTGTGTGCATGCACGCTGGTGCATTCCTGTGTGTCTAGAAGTGCAGAAATATTTTTCCATCTGAGTTCCAATTGTTCTGGGATATTTTGCCCAAATCCTTAAAAAAAAAAAATTAAATGAGAGAAATATTGATTAGAGTGTGTGTTCACTCGTATTTCATGTGTTTTATCATTGCATTCATTATCATGTAATCATATAATGATTTTATTTTATTTGTAGCTTATTCATCCAATACATGATCACACTATTTATCTGAATGAGAGTCACAAGAAGCAGCTCAAGGAGCAATATGGTAAGCTATCTACTTGTAACCATCAGCAATTTCTTTAATAGGAAATCATGATTTATTCCGCTTTTTAATATTGCAGATCTTAACTTGTTTCTGTTTCTCCTCTCTTAATAATTATCAGGAATAGAGCCGTGGACTTTTGAGCAACATCTTGGCGAAGCAGTTTTTATTCCAGCCGGATGCCCTCATCAAGTAAGAAATAGAAAGGTTAGTTTTCTTTGTACTCTATTATTGATTGATATCGAGTATTTCAGCAATGGAATTTATGAATGTGATTTTTCTATTTTAGTGAATTTTTGAATGTGATTGATATGTAGTGAATTTATGAATGTGATTTTTCCATTTTAGTTATACACCTGATTTTTTTGCCCTTTATTTAAGATGGTACATTTATCGATTTTCTTGGATGTTATAGGATTTTTGTATTACCCTTTAAATGAATAATTTGATCTATTGGCCTCAACTAATGATTTTCACCCTTGATAAATTTGAAAAAGTTGGCAGTGAAAAATCAGATAGTCTCAATCAGGTAAAGTAATGAAAAGTACCTGGAAAGTAATTTCATTTAATTCTAAAAAATGTCACTAAAAATATAAGTATGATCTTTATACATGTATTCAGTTACACAATATTTTTCTCATCTTGCCTCATGCGTGGTAGCATATATATTCTGAACTTCTGTTATTGTAATTTTTCAGTCTTGCATCAAAGTAGCCATGGACTTTGTGTCTCCTGAAAGTCTTTTTCAATGTGTCAGTTTAGCTAAGGAGTTTCGACTGCTTCCAAGGACTCATAGGGCAAAGGAAGATAAATTAGAGGTACATATTTTTCTCTGCTCATTTCCCCTTTTCTTCTTCCTTTTTTTTTAATTTATTTTTTTTGAGAAAAAAAAAAGAACATTTCTCGCTTAACTTGGCAACTTTATCTGATGTATACTTAATGAAGGTCaTCGTTTTTTTTTTTTGGTTTATTATTTTACGCGCAGATAAATATGCGTATGACAGTCTGGGTAAGAAATATAAATTAGCTTCACATTATGTAGAAACTGACCCGACAACTATTTCATCATTTTATGCAGGTGAAGAAAATGTCCGTATATGCCGTGCAAGAAGCTGTGAAAGAAGCTAAAAAATTGATATCCTCTATCAGGTCAGACCGGTGTTTTTTCAAGTTACAAAACAATGCTTCTGTCAAATAGTGAAGTATTCTTTTGCTACTTCGATAAAATAAGTAATATAGTGCCCATTTTCCAAAATTGGAACTGGTTCTACATCCCTAGTCTCTAACTCTAATGTTGCTCGATATGTACTGCAGGCAGCAGCGTAAAAAAGAGGAGTAGGGACATAACCGAACCAAAAAGTCCTTGGTATTCCTCAATGGACATGATAGGAGAAACGGAGTAAGGACATCTAAAAAGCGAAAACTGATAAATTTGTGTAATCATTTCTATGCCTGTAGCTATTGAGCAGCTGATGAATGAGGGAGAGGGTTCTTATTTATATTACTGTGGAGACTAATATACGCTTGTAGACAAGTTATCTTAAAACCATCTTTGTACTGATATATTCTGCAATGGATGTTTAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264110.1	2.2e-64	lysine-specific demethylase JMJ25-like
Swissprot	Q9SSE9.1	2.1e-48	Protein JUMONJI 25
trEMBL	A0A5P1ETN3	2.7e-64	JmjC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G00990.1	64.52	6e-60	226		Transcription factor jumonji (jmjC) domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G03616	AT4G00990.1	155	55	32	186	683	837	64.52	6e-60	226
AfisC8G03616	AT1G11950.1	150	62	32	181	722	871	58.67	8e-51	196
AfisC8G03616	AT1G62310.1	142	55	26	167	742	883	61.27	7e-50	193

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02373.19	JmjC	Domain	32	130	63.1	2.8e-17

Gene Ontology

Accession	Ontology	Name
GO:0000785	C	chromatin
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009555	P	pollen development
GO:0009908	P	flower development
GO:0031490	F	chromatin DNA binding
GO:0032454	F	histone demethylase activity (H3-K9 specific)
GO:0032776	P	DNA methylation on cytosine
GO:0033169	P	histone H3-K9 demethylation
GO:0048366	P	leaf development
GO:0060969	P	negative regulation of gene silencing
GO:0070919	P	production of siRNA involved in chromatin silencing by small RNA
GO:0080188	P	RNA-directed DNA methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network