result

Gene information

Detail information of AfisC8G03756

Location

Gene	Chr	Start	End	Strand
AfisC8G03756	chr8	699248240	699251438	+

Sequences

CDS

Protein

Gene

>AfisC8G03756
ATGCAGTTGTACCTTCCGGAAAACACTCCAGAGCCAATGAAACTATACAGAGAAGACAAGCTCATCCATTTACAAGGCAACGATGTCCATCGTAAGCTGGAAGAGTGGGATCGCATCTACAATTATGCATACTACAACAATCTTGCTAATCCGGATAAATGCATTACTAGGCCTGTTCTAGGCGGTTCTAATGAATATCCTTATCCGCGCAGAGGAAAAACTGGTCGAGCTCCAAGTATAAATGGTAATAGATATATGTTAATAACGTATCATTTGTCAAATTAAAATGTATAGAACTGCTTTTAGGTGCATTCATGATACACAGATGACTGATCATGTCACTAGTGTGCAAAACCACTCATTTCGTCTAGTAAGTATAGAAATGAGCGTAAGCGATGCAACTTGTATTGGTAAATTAGTTTCTAGTTTTAGTACTCCATTTTTATAAGTAAACCCATCACCTAGTGCGTGGAAATGACCAATGTGAAAGTATGCCGTTTAGCTGAGTGAATCTGAGTAATGAGAAACCAGGAAAAATAGTTATGGTTTATGCTTGTAAGTTCAAGGTCTTTCTTTGATTGCAGATCCAAACACCGAGAGCATATTGAATGATATTGTAGGCCTCCACATATATGTACCTCGAGATGAGCGGTTTGGTCATCTAAAAATGTCTGATTTTCTTGGTTACTCACTCAAATCATTAGCTCTATCTACCATCCCAAAACTTAGAGCAAAATTTTATGACACTGCTGAAGTGTTTGACTCGATGGAAGATGTAATGAAACTATTCAAAGGCGGTTCTGCTCTTCCAAAAACTCATTTTCTTGATTGTATTCAAGAAAATAATCCATTAGAGTTTATCAAAGCTTTGTTTATTAGAAAAGACAGTGAACAATTCTTGAAGTTTCCCTTACCTGATATTTTGAGAGGTATATACATCATAATCAAAGCTCATGAAATCCATTTCTTACATATGTTTTCATGCATTTTCTGATTGTTCAATATATTTTACCTTGTACACAATAACTCTGCATGGAGAACAGATGAAGATTTTGCAACAGAAATGTTGGCTGGTGTGGTTCCTGTCACAATATGTAAGCTCAAGGTAAAAAATAACGATCAAAGCATTTCAGTTGGAATTCAAAACTGTTTTTTATTAGGTAAAGGCATAAGCTTCATTTTGTTTTAATCTTTAGTTTGTTTTAAGCTTTTAGAAGGAACTGATTTGTGTTCATAAATTTCATGTTGTAAATGAAAGAAATTAAAGAAATACCTTCTTCCGGTTTTGAGTTCGTTAACTCCTTGAAAGTTCGTCAATCTGTTGTGCAAAGTGATTGTTTGAGTGATTGCTTGATAACATCGAAAGTCGGGTAATAAATAACTTGACATATTTCTATCATCACCTATATAGAGGTTAATGTAAACTTTATATTCCCTTCAAACTTTTGTTGTACAGGTTACAAGTGCAGTCGATCTCTTTCAAACTGGAAATGTAGCTCTTCAAAAAGCAAAATTGTTGGAAAAGAAATCACCCAAATGGATGTGTATTGCAATTATTATTTTGCTCGTAATTGTTGCTGTGATTGTCCTCTTTGTGCATCCCTGGAAGAACTGATTTTATGTGATAAAATATTTTCTATGTATCATCAAACCGACCGTAGGGAGGTTTGCCTACTTCTACTAGCCAAAATCAATTTTTTTGAAGCCAAAAAAACATGGAACCAGCTTTCTACTGTTTCTCTTCGTGCTCTGCTCAATCTTCTACTCCTTGGTTTCAGCGGTAAATATCGCAGCAAATCCTCAAACTTGAATGGATCTAGACTAAATCAAAATTACATCCTTTCAAATTGATAGATCCTCAAACTTTAATGGATCTAGCCTAAATCAAAATTGAATCATTCAAAATTGAGTCACCATTTCACCAACTACTCAAATTACAATCTTCCCATTTTAGAAAACAACTAATTCCAAACCCTAGAAATCTTCAATGTCTTTCAATGTCAAATCCACAACAATCTTTCCATACCAAATCTTGATTCGTCAATGTGACGGTCGACAATGGAGCAGTCGGTAAAACTTGCATGCTAATTTCGTACACTAGCAATACCTTTCCTACGGTTAGTGTTATGCATCTTTTATTCAAAATTTTACTTTTTTTTTCATTTATTTTAAGAGTTGGTTTGTAATCGATTATTGAAATTAGGAAGTCTTTAGCTTTTTTTTCGTTAGTGCACCTGTGTGTATGTTGTCTGTTCAGGGTTAATTATAATGGACATTGAAAGTCAAAGCAATTTTAAAATTACTTGAACCGAAAGGATACGTTCATGATTTGGGAATTGAGTATTAAAGACTGGGTAAGTGAGCAGACAATGTCTTCTTGAGAATGGAAATATAAGGAAATACATACACCCTGAAAAATAATATTTCTATTGATCGTAGCTCATATTTTCCTTTAAGTAATATTATGTTTCCTTTTTCTAATACAAATATCACGATTTTTACAAATACCATGAATAATGTAATTTTGCTTATAAGTATGGTTTTGTACTCGCTTAAAATCTGGAAAGGGCTACTTCAATTAAGAACTAAAATTTTAATGTATATCTTAGTATAGAAAGGTAAAATTAAGAGTTCATTTTTTTTGAATAAAATGATATTTCTTATCCTAATGATTAAGCAATGTAATATTTCTTTTGATCTGGAAGATTATCCTCAAGTCCAACGACTATCTTCATAAGGAAGGGTAATTACTCAGCGCAGTACAAATATCATAGTAAAAATTTGATATTTCCCCTTAAATAGTAGTTCATCTGACCGAAGAATTGAGATGTCAGTAAAATTATCATTATCCTCGTTCCAACTGTGTAGATCTTATGACATATTCATTCGGTAGTTTATGAACGGTGTCTTGTTTATCAATCTTCTCAATGTTAAAGAAAAAAGAAAAAGATGACTCAGGACAAAAGAAATCGCTAAACATGCACATGAGAAGATCTTTAGCTATTAATGTACACTCATGGTGTGAATTATATAACCATGTTTTCAGGCAGAAGTGATATTTCTGGGTCAGCTCAGGCACCCACATCTTGTAAAACTTATAGGCTACTGCTGCGAGGATGAGGAGTGGCTACTTGTATATGAATTCATGCCTCGAGGAAGCCTAGAGAATCATCTGTTCAAGAAGCGACCATTTATTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244037.1	6.6e-75	probable linoleate 9S-lipoxygenase 5
Swissprot	Q43191.1	6.4e-59	Leaf lipoxygenase
trEMBL	A0A5B6ZBT2	7.8e-62	Lipoxygenase (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G55020.1	52.68	6e-59	224	ATLOX1;LOX1	lipoxygenase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G03756	AT1G55020.1	224	95	4	2	217	163	383	52.68	6e-59	224
AfisC8G03756	AT3G22400.1	226	104	4	2	217	182	405	48.67	1e-53	206
AfisC8G03756	AT1G17420.1	228	123	8	2	218	224	443	37.72	6e-29	124

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00305.16	Lipoxygenase	Domain	13	217	174.6	2.8e-51
PF07714.14	Pkinase_Tyr	Domain	215	263	31.4	9.9e-08

Gene Ontology

Accession	Ontology	Name
GO:0005506	F	iron ion binding
GO:0022900	P	electron transport chain
GO:0006631	P	fatty acid metabolic process
GO:0040007	P	growth
GO:0009536	C	plastid
GO:0009611	P	response to wounding
GO:0009695	P	jasmonic acid biosynthetic process
GO:0009737	P	response to abscisic acid
GO:0009753	P	response to jasmonic acid
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0010311	P	lateral root formation
GO:0016165	F	linoleate 13S-lipoxygenase activity
GO:0030397	P	membrane disassembly
GO:0034440	P	lipid oxidation
GO:1990136	F	linoleate 9S-lipoxygenase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network