Detail information of AfisC8G04039


Location
GeneChrStartEndStrand
AfisC8G04039chr8727671879727697183+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020269892.10.0e+00AT-rich interactive domain-containing protein 4
SwissprotQ6NQ79.11.7e-253AT-rich interactive domain-containing protein 4
trEMBLA0A5P1EMK00.0e+00ARID domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G43240.158.700.0 866ARID/BRIGHT DNA-binding domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag181370.t1
Allium fistulosumAfisC8G04039
Allium sativumAsa1G01487.1
Arabidopsis thalianaAT3G43240.1
Oryza sativaLOC_Os08g27240.1; LOC_Os08g35000.1; LOC_Os08g35000.2; LOC_Os08g35000.3; LOC_Os08g35000.4; LOC_Os08g35000.5; LOC_Os08g35050.1; LOC_Os08g35050.2; LOC_Os09g26390.1; LOC_Os09g26390.2; LOC_Os09g26390.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01388.18ARIDDomain56966646.05.8e-12

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0003677FDNA binding
GO:0006351Ptranscription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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