Detail information of AfisC8G04055


Location
GeneChrStartEndStrand
AfisC8G04055chr8731803031731827207-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrTHU54529.13.1e-22hypothetical protein C4D60_Mb10t26060
SwissprotQ9C5K8.13.7e-12Jasmonate ZIM domain-containing protein 12
trEMBLD6MK947.0e-24Protein TIFY (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G20900.145.226e-1887.0JAZ12;TIFY3Bjasmonate-zim-domain protein 12

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Ortholog group
SpeciesGenes
Allium cepag287652.t1
Allium fistulosumAfisC8G04055
Allium sativumAsa1G01572.1; Asa4G01523.1
Arabidopsis thalianaAT3G43440.1; AT3G43440.2; AT5G20900.1
Oryza sativaLOC_Os04g55920.1; LOC_Os04g55920.2; LOC_Os04g55920.5

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF06200.11tifyDomain437461.62.8e-17
PF09425.7CCT_2Motif12514945.54.3e-12

Gene Ontology
AccessionOntologyName
GO:0042742Pdefense response to bacterium
GO:0005634Cnucleus
GO:0009555Ppollen development
GO:0009611Presponse to wounding
GO:0009733Presponse to auxin
GO:0009751Presponse to salicylic acid
GO:0009908Pflower development
GO:0010112Pregulation of systemic acquired resistance
GO:0042803Fprotein homodimerization activity
GO:1900067Pregulation of cellular response to alkaline pH
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000022Pregulation of jasmonic acid mediated signaling pathway

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13464JAZ; jasmonate ZIM domain-containing proteinEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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