Detail information of AfisC8G04459


Location
GeneChrStartEndStrand
AfisC8G04459chr8827928932827929357+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrOVA05434.11.1e-17AP2/ERF domain
SwissprotO82799.14.2e-17Protein NGATHA 1
trEMBLA0A200Q4P48.2e-18AP2/ERF domain

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G46870.143.935e-1990.1NGA1AP2/B3-like transcriptional factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag360122.t1
Allium fistulosumAfisC8G04459
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family3313263.31.4e-17

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0009536Cplastid
GO:0009741Presponse to brassinosteroid
GO:0009910Pnegative regulation of flower development
GO:0010073Pmeristem maintenance
GO:0010358Pleaf shaping
GO:0044212Ftranscription regulatory region DNA binding
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding
GO:0048527Plateral root development
GO:0048573Pphotoperiodism, flowering
GO:0080167Presponse to karrikin

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09287RAV; RAV-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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