result

Gene information

Detail information of AfisC8G04645

Location

Gene	Chr	Start	End	Strand
AfisC8G04645	chr8	856239450	856240814	-

Sequences

CDS

Protein

Gene

>AfisC8G04645
ATGGATTCTGGAAGTGGGTTTTTTTCAATGGAAGAACCCAATTTAGATCCGAAGTGGCTTATTGATCCTAAGCTGCTTTTCGTTGGTCCAAGAATTGGAGAAGGTGCTCATGCTAAAGTATATGAGGGGAAGTAAGTACTATCCGGTTTTGTATGACTATGAAAAAGTTGCGTTTTATTCAGATTTTTTGTATGTTTTGTGTAGGTATAAGAATCAAAATGTTGCTATTAAAATTTTGCACAAAGGGGATACGGCAGAAGAAATAGAGAAGAGAGAGGGTAAATTTATGAGAGAGGTTTCTATGCTTAGTAAAGTTCAGCACAAAAATCTTGTAAAGGTTGGATTTTGATTTATTTTTTGTTGATTCAAATTTGTTATCTTACTGTTATGCTGTTAGATTCAACTTGGTTGTCCATAACCTCTCACTGAATTGCATGAATTAACCACGACAACATATTCCTGATAATAGGCAAATAAATTATTAGCATCATAAGAATTCAACCCTTGCATTTTGCACTGGCCAGATGAACTATTGTTGCGGATAGTTTAATTTAGATGGCAGTTGATTATCTATTACTTTTACTGCAGTCCAAAATAATATCTGTTATTCTCTAATGTTGCATGAACATAAGATATAGAATGAATCTATTACTACATGAGTTATTTGTATGTTCTTTATCCACCTTTGTATCCAAGCAAAGTTATTAGCAAGATACTATAATCTGTGGCATCAAACTCAAATTTAAAACTACTTACCGGCCTATAGGACACGTTCTATGTACAGTAAGAGTAGAACATCCATCTCTTATAGAGTGTTGAAGAAAACTCCAACTAAAGAAATAAATTTAATTGGTTTCCTTTCAGTTTTCCAATAACAAGTTTATAGGGTATTGGGAATGCTCTTAGAATAGGAGACTGTAGTACCTCTACTTAGAAGTAAATTCAATAGCTAAACATCATCTAGTTGATTTGTATGCTTATTACATGATGAGTGGGCTTGCTATGGAAGTGTTAGAATATGGGTGATGAGTGAGATTGCTATGGAAGGAGAGACTGATAAAGAGTGATCTATTGTGTTTAAAGATAGTAGACAGTTAGATATAAACTATACAGGCTTGAAATATATAAGACTATATGCAGTTCATTGGAGCTTGCAAGGAGCCCATGATGGTGGTGGTAACTGAGCTTCTGTTAGGAGGATCATTGAGAAAGTACTTGCTGAATATGAGGCCAAAAAGTTTAGACCTTCGTGTGGCAGTAGGATTCGCATTGGACATTTCTAGAGCCATGGAATGCTTGCACTCTCATGGAATCATTTATCATGATCTGGAACCTGTTAAAAATATCTATGTATTAGGAGATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245673.1	4.9e-73	serine/threonine-protein kinase HT1-like
Swissprot	Q9ZQ31.2	1.4e-24	Serine/threonine/tyrosine-protein kinase 13
trEMBL	A0A5P1EBB2	3.5e-73	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G27560.1	72.84	9e-69	255	ATN1	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G04645	AT3G27560.1	162	43	1	1	162	1	161	72.84	9e-69	255
AfisC8G04645	AT5G40540.1	153	41	0	1	153	1	153	73.20	7e-66	246
AfisC8G04645	AT5G50180.1	162	41	2	1	162	1	155	70.37	1e-64	241

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	30	152	87.6	7.2e-25

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001666	P	response to hypoxia
GO:0004674	F	protein serine/threonine kinase activity
GO:0005789	C	endoplasmic reticulum membrane
GO:0009686	P	gibberellin biosynthetic process
GO:0009744	P	response to sucrose
GO:0009750	P	response to fructose
GO:0009873	P	ethylene-activated signaling pathway
GO:0046777	P	protein autophosphorylation
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0071281	P	cellular response to iron ion
GO:2000035	P	regulation of stem cell division
GO:2000069	P	regulation of post-embryonic root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network