result

Gene information

Detail information of AfisC8G04698

Location

Gene	Chr	Start	End	Strand
AfisC8G04698	chr8	863163197	863170548	-

Sequences

CDS

>AfisC8G04698
ATGAACGGAGGGGATCGGCAGATGGAATTCGATCATCAGCAAGATAATCAAGCCAACGGAGATTCCGGCATCGATGGTCCCCTCAGATGTCTTCGTTGCGGAGTTGGTGCAAATTCTACGCCACATATGCGTCGTGGCCCAGAAGGACCAAGAACTCTATGCAATGCATGTGGAATTGCATGGACAAAGAACTTGAATAAACAGGGTAAAATGAGAAGAATGATTGACTCTGTTGCACCCACAGATGATCCAAATGCATTATCAGTGCCTGAAATGGACATGGAATTCGAAAACGAAGACAAAGCTTACGAGTTCTACAACAAATACGCTGGTGTTGTAGGCTTCAGCGTCCGCAAAAGCTCATCCGACAAATCATCAGAAAACATCACACGATCAAGAACATTTGTGTGCTCAAGAGAAGGATTCCGCAAGGACAAAAAAGGAGCAAAAGAAGTAAAAAGGCCACGACCTGAAACCCGTATCGGTTGTCCAGCAAGAATGACCATTAAAATCTTGCCAAGTGGTGGATATCGAGTCACAGAATTTATTCAAGATCACAATCATCAGCCTGCGCCTCCATCAACTACTCATCTATTAAGGTCTCAAAGAATCGTGACTGAATTTCAAGAGCAAGATTTGTCTGATGATTCTGAAACAACTCCAAAACCCTCATCTGAGCAGACACGAATTGTCCATTCTCTCCCCACAGATTATCAAAATTACTTAAGAACCAAGCGCATGAAATCCATGCAAATGGGAGATTCAGGGGCAGTTTTGAAATATCTACAAACAACGCAACTCAACAACCCATCTTTCTTTTATGCCATACAAATAGACGAGGATGATAAATTGACAAACATATTTTGGGTTGATGCAAAGTCCGTAAGGGACTTTAACTCTTTTGGAGATGTTGTTTGTTTCGACATGAGTTATAAAATAAATGGATATGGCAGACCATTTGCACCATTTCTTGGTGTCAATCATCACAAACAAACCATTACTTTTGGCGCTGCATTACTCTACGATGAGTCTTTAGAATCTTTCAAGTGGCTATTCGACACTTTCAAATTTGCAATGCGTGGTAAGCAACCACAGACAATTTTGACTGATCTAACCCCGATTATGAGTAATGCAATAGTTTTAGCGTGGCCAGGTACTGCTCAGCGTACATGTGTATGGCATGTGTATCAAAATGCTACAAAGCACCTTAGTCATATTTTCCAGGGATCGAAAACTTTTGCAAAAGATTTTTGTAAATGTATATATGATTACGAAGACGAGGATGACTTTTTATTTGCATGGAGATCATTGATAGAGAAGTATGATCTTAGAAACAACGAGTGGTTGACCAAACATTTCGATGAGAGAGATAAGTGGGCATTACCATATGGGAGGCAGATATATTGTGCAGACATGAAAACAAATCTTCAGTCTGATACTTTGACTACCGCCTTAAAAAAATACTTGAGTCCGCAGATGGATCTCTTGACATTCTTTAAGCATTACGAGAGGTTACTAGATGAACATCGATATGCTGAATTGCAAGCAGATTTTCATGCAAGTCAGAGTTTTCCAAGAATACCCCCATCGAAGTTGTTGAGACAAGCGGCTAGCATATACACACCAGTTGTTTTTGAAATATTTAGGAAGGAGTTTGAGATGTTTATGGATTGCATGCTATTTAACAGTGGTGAGGTTGGCACTATATCTGAGTATAGAGTAGTTGTCCCTGAAAACCCAAGAGAACATTTTGTTAGATTTGATTCGACTGATTGTTCTGCTATGTGTAGCTGTAAGAAATTTGAATTCACGGGAATGCAATGTTGTCATGTGTTGAAAGTGCTTGATTTTCGAAATATCAAAGAACTTCCGGTTAAATATTTTTTGAAACGGTGGACAAAAGAAGCTAAAGTGGGAAATGAGGAGAATCATGGAGTATCAAATGGTAACGATTTTAGATCTCCTACAGCTGCCTCAAATCAATTTGCTTTGCAAATGTCATATGTTCAACATCAAGGATTGCAAAGCACAAATCATATTAGTCAAGAATCACTGACATCTGACTTGCATCGACATTCATTCCATGAACCCACTCAGTTAACTCAGGGTTATTTATCTCCAGACATGCACTCTAAACATTTCTTTAATACTACCCAACATCATCAAAGCAACAACACAAGCCATTGA

Protein

Gene

>AfisC8G04698
GTAGATCAAAGATCTGGTTTATGTCGGACTGAAATGGCTCGCAGTCCGTGGCTTTTCGCGGTTGGACCGTGGTTCGGTTTGGTCACCATGACCATGGATGAAACATAATTGTTTTACACGTGTAAAGTCATCTAGGCATCCGACTGAAAAAGCGTGTTGCCTTTTACTGTGTATTCGCTGTCTAGGGTTTCTCAGCTGTTCTCCTCCGCGCCGAGACGACGACAAACCCTAGCCCTAAATCTTCCCAAATTCAAATTCGCGCTTAGTCAAATATCTAACGATCATAAGGTTCCGTGGTGTAAAATGAACGGAGGGGATCGGCAGATGGAATTCGATCATCAGCAAGATAATCAAGCCAACGGAGATTCCGGCATCGATGGTCCCCTCAGGTTACCTACTTTGTCAGTTTATCAATTTTGGTTATTTTATACACAATTGAGGCTATTGGAGTAAGGATGAGTACAGTTTAGCTAGAAATTGTACTAAATAGTGCCCTGAAGTTAAAAGCAGTAAACTGTAACTTGGGAAATATTTATCCTAGCACAACAAGCCAACTTGTGCCAATCTGTCTAATCATCAAGATTTTGGTTAAAGTTAGATTAAAATATTAGATATCAGTATATAACACTTTAATGCAGTTTCTGCTTTTATCCATTACGTCTAGATGGAGCTTGGTCTTGCCTGGCTATGAAGGCATACCCTTTTTAAAGAGTGTAATCAATCACTGAACTTACAAATTACTTGTAGTTTAACATCGACAGATATGTCAAGGAGTTTGTAAAAGTGAACATCTATTGGGTGGGTTACCAAACCTTGTTAGTTGTTACTAAACCATCTTATCTTGCTATTTTTTCTAAAAAGCTACTTTACTTTTTTTTTTCAAATGCGACCCCTAAGGCTGAGTTGTTAGTCCATACAAGCACAGTTTTTCCTTTTCATTTGAAGGCTTGAACGTTGAACCCACACTGAAATTTATTAATTTGATCCTTGTAACTTGCAATAAACTTATCTTTTTGTGTGTGTGCACGCGCTTACACGTGAGCGTGTGTGCGTTTGTGTGAGATGATTGTTTATCTGCCACCAGTTTTAAGGAACCTTGTTTGTACACAACTTACCGTATCAATCAAATTTCGGAATTTGAACTTACAGGTATAGAATATAGATCAAGGATAGAAATGGTTGCATGTATGATGGCAATGATGGGTACATTGAATTTTTTTTGCTTTCTATACCGTAGTACTTATCTGTAGAATTTGATTTACATAGATGTCTTCGTTGCGGAGTTGGTGCAAATTCTACGCCACATATGCGTCGTGGCCCAGAAGGACCAAGAACTCTATGCAATGCATGTGGAATTGCATGGACAAAGGTATGTGAACAAAGCATGTCATTAACTTTTGTACATAGGCTTATCATCGCAATCATTAACTTTTGTATCTTCATCATCACAAGTATGTTATAAAATCCACCATGAGTTATGACTACCACACATTGTTCTGAAATGCTTCGTCATTATTTTCTTACCCAAACTCCATCTTGGGGTGTCTCAAGTTAATGAGCTCAGATCATGAAAATGTGTATTAGAGAATCACTTGTTATCACAAAATCAATCTATCATGTGAAATGTGACCTCTATTGGTTATGTGAAGAGCAACCTCTTACTATTTATGTATGATCAGTTATATTATTTAAAGGAGATGGTACCTCTGCACATGTGGCATATGTTAGCCAAACACATGTAGACCATATGGGATGGTTAAGCGCATGGATGAAAGGACCTAGTTCTGATGCCAATTTAGAGAATAATTTATTATCACAAAATCAATTGATGTCGCGAAGAGTGATCTCTTAGTATTCATGGTGGGCTAGCTACATTAATTAGAGGATGTGAGATTATTCTTAACATGACCATGCATATGTGTCGTATCTTAAGCCAAACACGTGAACACATATTTTGGATGATGTGAAGCACGAGTGACGTTAAAACACGAATGGAATGACCTAGCTCTAATAATATCGAAGAACTGATTGTTACCACAAACTAGTTGTTGATATGAATAGTGGTCTCTTAGTATTTAAGGAGGGTTAATTAAATTTTTTAGAGGTGGGTATATTCTCAACAATGTGCACAATGATTTTTTTTGGTTGCATTAGCCGAAAATGAAACTAGAAATCAATAAATTAGAGTCTGTTTGGTTTCATTTTAAGTTTTGTGTTTTCAACGTGCATTAAAAAATATGTAGAGTAGATTTTAAAATCTAAGCCATTACAATGATGGTGGAATGACGGAGGGGATAAATTATTTTCCGTGCTTTTATTATTTCCCGGAATACTGAAAAAAAATTGTTTTCCGTGTTTTAGGAAATAACAAATGCATGGAAAACAATCCATCCCTCCATCGTCCCTTCATCGTCGTAGTACCTTAAACTTTTAAATCTACTCCTCCGCTCTCCTTACATTTTATAATGCACCTTGAAAACTAAAGCACAAAACTAAAAATGAAACCAAACAGACCCTTAGTATTTTGTTTGACTTGATTCATAATACAATATGCATACCCTAATTAGTTAGGATAATCTTGAAGTGTTGTAATTTTGTATTAGATTGGAGTAATTGTTGCAATTACATTTGTTTAATGAACAACATCTGCATTTGAAAGGTTCACATCTATTGATATTTCTGGATAGGATGAGTGACGGGTTGTAGAGATATAGATATTACATTGTCATTCCATTTTAATCATTTGTGTGTGTGTATTAATGTGATTTACTTGGACAGCTGGACTATGTTGTGTGTGTATCAGTGTTTTTAAAAAAACCCGTCTCGAGGCTCACCAAGAAAATGTAAAACGATTGGAGGCTTGCTCATAAAGGCTTTTTGCTTCTAAAACTTACGCCTCAGCAGTTTGAGGCGTGCAAAACATACGTCTTTCACGCCTCAAGCCGTTGAGGCATTCAATTTAAGATTAAAATTACCTTCAATTGTAACAAAAATCGGGTTTTAAAAAGTTACAAAATGCTAATCTTTTCATGAAAAAGAGAGAAACAAAAAACGAAAGCAAAAGAGCAGAAGCACATAATTTTCTTTATTAATTTAATATTGAAATCAACATGTAGTGATCACTTTCAATATTTTTTATAAGTTGAATTTGGTTTTTGATTCCGTTTGAACTCTTTCAAAAAAGAACTGGAAAATACGAAGAAGAAAAAATTAAAAGAACAACTTACGTAATTTGAAACTGTTATTTGTTGTTCGATATGCTCTACTGTCAAGTTATATGTTGCTAACTTGCCAAGTTGTATCGATAAACAATGCATATTTACTATTAATTCGGAGTGCATGTTTATTGTTTAGTAATAATTGTAAACAATGGATGTTATCGTTTAGTAGAAATTATATAATTAATTGATTGTTTGACATGTCTAGTTCATTGATATGTCGAGTGTTTGATATTTACTTGGAAAATTGATGCCCCAACGTCTCGGGTCTTACACCTCGCCTCACGAGCACAGAAACGCCTCATATGCGTTTTCATCTTTTAAAACTTTGAACCAAAGAACCAATTTCGCTTGTGAACTGTATAAAAGTATGCACCGAACGCACAACACTTACCCGGATGACATTATATATGTATGTATGTGTGTGTGTGTATCACTTGTATTCAAACTGACAAATCATTTTAGAACTTGAATAAACAGGGTAAAATGAGAAGAATGATTGACTCTGTTGCACCCACAGATGATCCAAATGCATTATCAGTGCCTGAAATGGACATGGAATTCGAAAACGAAGACAAAGCTTACGAGTTCTACAACAAATACGCTGGTGTTGTAGGCTTCAGCGTCCGCAAAAGCTCATCCGACAAATCATCAGAAAACATCACACGATCAAGAACATTTGTGTGCTCAAGAGAAGGATTCCGCAAGGACAAAAAAGGAGCAAAAGAAGTAAAAAGGCCACGACCTGAAACCCGTATCGGTTGTCCAGCAAGAATGACCATTAAAATCTTGCCAAGTGGTGGATATCGAGTCACAGAATTTATTCAAGATCACAATCATCAGCCTGCGCCTCCATCAACTACTCATCTATTAAGGTCTCAAAGAATCGTGACTGAATTTCAAGAGCAAGATTTGTCTGATGATTCTGAAACAACTCCAAAACCCTCATCTGAGCAGACACGAATTGTCCATTCTCTCCCCACAGATTATCAAAATTACTTAAGAACCAAGCGCATGAAATCCATGCAAATGGGAGATTCAGGGGCAGTTTTGAAATATCTACAAACAACGCAACTCAACAACCCATCTTTCTTTTATGCCATACAAATAGACGAGGATGATAAATTGACAAACATATTTTGGGTTGATGCAAAGTCCGTAAGGGACTTTAACTCTTTTGGAGATGTTGTTTGTTTCGACATGAGTTATAAAATAAATGGATATGGCAGACCATTTGCACCATTTCTTGGTGTCAATCATCACAAACAAACCATTACTTTTGGCGCTGCATTACTCTACGATGAGTCTTTAGAATCTTTCAAGTGGCTATTCGACACTTTCAAATTTGCAATGCGTGGTAAGCAACCACAGACAATTTTGACTGATCTAACCCCGATTATGAGTAATGCAATAGTTTTAGCGTGGCCAGGTACTGCTCAGCGTACATGTGTATGGCATGTGTATCAAAATGCTACAAAGCACCTTAGTCATATTTTCCAGGGATCGAAAACTTTTGCAAAAGATTTTTGTAAATGTATATATGATTACGAAGACGAGGATGACTTTTTATTTGCATGGAGATCATTGATAGAGAAGTATGATCTTAGAAACAACGAGTGGTTGACCAAACATTTCGATGAGAGAGATAAGTGGGCATTACCATATGGGAGGCAGATATATTGTGCAGACATGAAAACAAATCTTCAGTCTGATACTTTGACTACCGCCTTAAAAAAATACTTGAGTCCGCAGATGGATCTCTTGACATTCTTTAAGCATTACGAGAGGTTACTAGATGAACATCGATATGCTGAATTGCAAGCAGATTTTCATGCAAGTCAGAGTTTTCCAAGAATACCCCCATCGAAGTTGTTGAGACAAGCGGCTAGCATATACACACCAGTTGTTTTTGAAATATTTAGGAAGGAGTTTGAGATGTTTATGGATTGCATGCTATTTAACAGTGGTGAGGTTGGCACTATATCTGAGTATAGAGTAGTTGTCCCTGAAAACCCAAGAGAACATTTTGTTAGATTTGATTCGACTGATTGTTCTGCTATGTGTAGCTGTAAGAAATTTGAATTCACGGGAATGCAATGTTGTCATGTGTTGAAAGTGCTTGATTTTCGAAATATCAAAGAACTTCCGGTTAAATATTTTTTGAAACGGTGGACAAAAGAAGCTAAAGTGGGAAATGAGGAGAATCATGGAGTATCAAATGGTAACGATTTTAGATCTCCTACAGCTGCCTCAAATCAATTTGCTTTGCAAATGTCATATGTTCAACATCAAGGATTGCAAAGCACAAATCATATTAGTCAAGTAAGCTTGTGGAATATTCACAAATACATATATACATATATACGTATACATATACATATATATGTATATGTGTGTGTGTATCTACATATATACGTATATATGTATATGTGTGTGTGTGTACACACACACACATACATATATATTAGTCAGTGATAAGAATAAAGTTGAAAATTCAAATATCATTTTTTTTTCACTTGCTATTTCTGTATGTCATATGCATCACAGGAATCACTGACATCTGACTTGCATCGACATTCATTCCATGAACCCACTCAGTTAACTCAGGTAAATGGCTACATTATTGATGACATCCAATGGGTTTAATTTTTCGTTGTACACTATGAGGACTTTCAGAAAAAAGAATGTCTACTTGTGGTGCAAATTCTTAAACCCTACTACTGTACAATTTTGGGATGTCTCGACATATATATAATCTCCCTTGTACAAATTTTTTTTTTACGAAAGTTGAAAAAATGATCTTCCTTGTTCAAAATTGGTGTCCATTAACAATGCTCATTTCAAAAGACGTGGAAGTGAAAAGGTGGAAAAATACCAGCCCTTACAACAAATGGGAGAAGAGGAAGGGACAAGATAGTTTTCCATGTTTTTGATATTTCCCAAAATGTGAAAAACAAGAAAAAAAATCGTTTTCGGTTTTGTATGTCAAAATCATTCTCCAAATAAATTGTTTTGGAAACCAATGCATTTTGGTTGTTATAAAAACCCAAAACTAAAATCTTCAAACCAAATAAGGCTTTAGTGTTTCAAATGATGTCAATGAATGACGCCCTTCATCATTTGAGTTTTTTTATTTCCAATGTATTGCAGGGTTATTTATCTCCAGACATGCACTCTAAACATTTCTTTAATACTACCCAACATCATCAAAGCAACAACACAAGCCATTGAGATTCATTTTTAATGGAGGTTCTCTCTACAAAGTATGTTTTTCTTACCATAATTTATTTAACCTTTTTTATATAATATCCAATCAGTATTACAATAGTAAAAATTCAAAACTGTGTAGCATGTCTCCTAATTCGTCAAGTAACAATATTTTTTGCAGCTGTTTGTTGTGCAATATGTGATCTAGTTCAAAATGATGAAGTTTGAAATACATTATTGCACGAGTACTGTCTTGCAAAACTGTTCAATCTAATAGTCAAGGTACATCTAATTTGAACTTGCTTTACTTGGAATCAACTTGCCTTTTATTTTATTTTCTTAATGAACTCGCTTTACTTGGAACAGTTTGGATTAAAGCTTAAAGTACTAATGAAGAGTACATTCTATATTTGAGAAATTTATATTCCCTCAGCAATTTAAATAATTTTGATAGAATTATGCCTTGTATAAAAATTCTAGGTTTCAGGCCATTTGTTTTACTGTTCCAGCAATTCATGCAATATTATATATCGTCGTGTAAGTAAAAGTTTGAAGTAGCTGAAAAGCCTAAAAGAATCGCTGAAGACTTCTGTGTAAATATGCGAGGATTGAGGAATATGTAAACTTACTAAAGCTGCGGTTTTGCTTTCGTACTACCACCATCCTGACAAGAATTTCATGTAAAGTAACTGAAATCTCCTAGGATGAGATATGAATTTGTGCATTAGGTTTTTAAGCTGAAAACTGTGGCATTTTTGTATTTTATTGGATAATGTAACTTAAAAGTTGTTGATTCTCCATTTTCTATTTCATTTCCTCTTTTATTTCAAGGTGTTATTAATTGTTCTATTTTACACCCCTGGATTTATTTATACATGTAATTTTCAGATTCAGACTGTCGGTAGAAAAATTGATTTCCACTTTATG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250033.1	0.0e+00	protein FAR1-RELATED SEQUENCE 5-like
Swissprot	Q9SZL8.1	1.0e-106	Protein FAR1-RELATED SEQUENCE 5
trEMBL	A0A8B9A8Z7	0.0e+00	Protein FAR1-RELATED SEQUENCE

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G38180.1	37.57	2e-107	387	FRS5	FAR1-related sequence 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC8G04698	AT4G38180.1	567	330	7	90	637	73	634	37.57	2e-107	387
AfisC8G04698	AT4G15090.1	563	365	6	90	639	51	611	32.50	1e-84	311
AfisC8G04698	AT1G76320.1	553	354	10	94	637	1	544	32.73	6e-82	302

Ortholog group

Species	Genes
Allium cepa	g319261.t1
Allium fistulosum	AfisC8G04698
Allium sativum
Arabidopsis thaliana
Oryza sativa	LOC_Os07g42400.1; LOC_Os07g42400.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00320.24	GATA	Domain	36	64	39.8	2.2e-10
PF03101.12	FAR1	Domain	104	189	83.3	1.4e-23
PF10551.6	MULE	Domain	304	398	88.2	3.5e-25

Gene Ontology

Accession	Ontology	Name
GO:0000977	F	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001085	F	RNA polymerase II transcription factor binding
GO:0001228	F	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0003682	F	chromatin binding
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0005667	C	transcription factor complex
GO:0006950	P	response to stress
GO:0007623	P	circadian rhythm
GO:0010017	P	red or far-red light signaling pathway
GO:0010218	P	response to far red light
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0016620	F	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0030154	P	cell differentiation
GO:0044710	P	single-organism metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K17604	ZSWIM3; zinc finger SWIM domain-containing protein 3	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network